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Matrix information:
(Help) ADAN-name: NBP2_1GCQ-13.PDB Scoring matrix: NBP2_1GCQ-13_mat Uniprot code: Q12163 Genome source: Saccharomyces cerevisiae Wild-type ligand: AAAAAAAA Foldx wt ligand score: 20.1 Foldx random average score for Saccharomyces cerevisiae: 14.940 Available information for Q12163 in MINT (Nov 2008): Nš of interacting proteins: 10 Proteins belonging to other specie: 0 Nš of interactions described: 20 Interactions with other species: 0
Genome scanning information:
Subcellular location: False Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 0 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 7179 Total fragments: 3214721 Proteins after random average filtering: 7179 Total fragments: 1369833 Proteins after disorder filtering: 4294 Total fragments: 50903 Proteins after pattern filtering: 1967 Total fragments: 8578 Proteins after MINT filtering: 7 Total fragments: 85
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
20.10
|
-1.71 |
0.00 |
| Best peptides |
RRRRFPRW |
0.00
|
-12.59 |
-10.88 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
SKPLPPQL |
10.48
|
-5.70 |
-3.99 |
|
EPSTPSRP |
10.99
|
-6.87 |
-5.16 |
|
KPLPPQLL |
11.34
|
-6.75 |
-5.04 |
| P53933 |
PPPLPNRQ |
7.42
|
-9.04 |
-7.33 |
|
RPPPPPIP |
8.43
|
-10.86 |
-9.15 |
|
RVAPPPLP |
10.31
|
-9.46 |
-7.75 |
| P53914 |
VKPLPPKE |
10.23
|
-7.25 |
-5.54 |
|
LPPIDPKD |
11.57
|
-5.10 |
-3.39 |
|
KNVKPLPP |
13.05
|
-6.34 |
-4.63 |
| P48562 |
SPLNPYRP |
9.29
|
-6.97 |
-5.26 |
|
MRQAPKRP |
9.40
|
-9.50 |
-7.79 |
|
NPYRPHHN |
9.41
|
-7.31 |
-5.60 |
| Q03497 |
GKFIPSRP |
7.65
|
-8.39 |
-6.68 |
|
EQPLPPIP |
10.29
|
-7.97 |
-6.26 |
|
APTTPNRT |
10.60
|
-8.28 |
-6.57 |
| P08018 |
RAPRRPLS |
7.60
|
-12.47 |
-10.76 |
|
RPNVAPHK |
9.36
|
-7.82 |
-6.11 |
|
HPTRPNVA |
10.00
|
-7.70 |
-5.99 |
| Q12469 |
ELKPFPRP |
9.57
|
-6.10 |
-4.39 |
|
LKPFPRPS |
12.99
|
-6.16 |
-4.45 |
|
RLAPSAPA |
14.62
|
-4.87 |
-3.16 |
|