ADAN database

Help mscoring

 

One and three code letter for natural and phosphorylated amino acids.                           (Please read this help!)

NBP2_1GCQ-13

Normalized sum of energies

 

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 3.513
0.0
3.46 3.909 2.998 3.306 3.579 3.634 2.698 2.194 2.126 1.946 1.951 2.036 3.815 3.482 3.628 2.033 1.12 3.104
R
2 2.166
0.0
0.799 1.82 3.017 1.291 1.651 3.176 0.323 1.729 1.303 0.87 1.008 0.737 0.096 2.615 3.168 1.593 1.057 2.011
R
PH
3 0.676
0.0
0.746 1.006 0.639 1.663 0.916 0.922 0.233 0.414 0.556 0.157 0.62 0.143 0.338 1.558 0.699 0.336 0.272 0.626
R
FKHYWPI
4 3.936
0.0
3.439 4.529 3.088 3.104 3.787 4.408 2.35 1.119 0.757 1.815 1.692 1.492 3.68 3.795 3.88 0.619 1.944 2.654
R
5 1.674 1.325 2.72 3.291 2.085 2.088 3.157 1.9 1.807 0.909 0.745 1.4 1.34
0.0
0.577 0.994 2.497 0.765 0.462 3.161
F
Y
6 0.535 0.156 0.616 0.659 0.633 0.874 0.61 0.649 0.55 0.438 0.261 0.421 0.34 0.234
0.0
0.45 0.396 0.28 0.291 0.316
P
RFLWYVMTKIS
7 6.342
0.0
4.236 8.079 5.591 3.361 5.167 6.869 3.235 2.89 2.511 3.304 2.42 2.766 6.174 6.539 6.143 3.726 3.398 4.053
R
8 1.257 1.206 1.217 1.294 1.217 1.223 1.276 1.324 1.004 1.061 1.095 0.955 1.017 0.641 0.854 1.258 1.216
0.0
0.649 1.156
W


Binding energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 5.877 2.364 5.824 6.273 5.361 5.670 5.942 5.998 5.062 4.557 4.490 4.309 4.316 4.400 6.179 5.845 5.992 4.397 3.484 5.467
R
2 5.099 2.930 3.730 4.751 5.952 4.222 4.581 6.109 3.254 4.662 4.237 3.801 3.937 3.669 3.030 5.543 6.102 4.526 3.988 4.945
R
PH
3 5.099 4.419 5.168 5.429 5.062 6.087 5.339 5.346 4.655 4.834 4.979 4.579 5.044 4.555 4.759 5.983 5.122 4.747 4.684 5.049
R
FKHYWPI
4 5.935 1.998 5.436 6.529 5.084 5.097 5.786 6.408 4.341 3.101 2.752 3.813 3.692 3.492 5.678 5.794 5.878 2.617 3.944 4.642
R
5 5.099 4.752 6.146 6.717 5.508 5.512 6.582 5.326 5.234 4.330 4.165 4.825 4.763 3.420 4.005 4.334 5.923 4.186 3.881 6.582
F
Y
6 5.898 5.516 5.979 6.023 5.996 6.238 5.974 6.012 5.864 5.801 5.621 5.784 5.703 5.598 5.358 5.813 5.759 5.644 5.654 5.679
P
RFLWYVMTKIS
7 6.834 0.528 4.759 8.529 6.042 3.811 5.740 7.444 3.724 3.340 2.961 3.752 2.868 3.298 6.650 6.989 6.594 4.301 3.846 4.503
R
8 5.898 5.847 5.817 5.935 5.858 5.823 5.917 5.965 5.604 5.702 5.736 5.596 5.656 5.241 5.454 5.899 5.857 4.600 5.249 5.797
W


Stability energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 28.158 25.190 28.414 28.869 27.892 27.529 28.652 28.257 27.778 27.926 27.837 27.094 27.753 28.313 28.679 27.338 27.478 28.473 26.559 28.589
R
2 27.273 25.844 26.377 27.158 28.146 27.027 27.197 28.780 26.038 28.376 27.562 26.630 27.528 27.304 24.882 27.129 28.957 28.830 27.054 28.405
P
3 27.273 26.597 27.918 27.981 27.735 28.331 27.921 28.076 26.391 28.006 28.243 26.833 28.289 27.785 26.769 27.862 27.684 28.381 27.249 28.182
H
RPK
4 28.393 25.156 28.427 29.460 28.216 27.753 28.758 29.395 26.564 26.670 26.429 26.956 27.527 27.558 28.133 28.068 28.081 27.240 27.215 28.402
R
5 27.273 27.880 28.256 29.843 28.420 28.303 29.553 27.950 27.266 28.113 27.598 28.028 28.540 27.134 26.257 27.098 28.929 28.543 26.780 30.098
P
6 28.267 27.750 28.863 28.738 28.770 28.173 28.561 28.990 27.325 29.321 28.912 27.579 29.171 29.059 27.365 28.494 28.417 29.641 28.434 28.885
H
PKR
7 28.661 23.593 25.966 31.143 28.112 25.646 28.580 29.709 25.945 26.141 25.526 25.688 25.593 27.216 28.931 29.024 28.548 28.350 26.329 26.897
R
8 28.267 28.282 28.445 28.585 28.429 28.555 28.619 28.598 28.490 29.016 28.965 28.365 28.948 29.101 28.654 28.497 28.452 28.725 28.213 28.992
Y
ARKCNTHSQDGEP

footer

    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER