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Help mscoring

 

One and three code letter for natural and phosphorylated amino acids.                           (Please read this help!)

YSC84_2A08-15

Normalized sum of energies

 

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 2.398
0.0
 1.772 1.79 1.682 1.285 1.82 2.631 0.97 0.966 1.182 0.84 0.421 0.553 2.383 2.599 1.929 1.624 1.204 1.795
R
M
2 2.089 1.863 2.421 1.003 1.777 1.216
0.0
 2.956 2.998 0.99 1.207 1.666 1.14 0.338 0.381 1.714 1.368 0.958 0.791 1.38
E
FP
3 0.495
0.0
 0.675 0.611 0.606 0.7 0.472 0.664 0.566 0.307 0.307 0.401 0.245 0.107 0.19 0.439 0.443 0.111 0.192 0.446
R
FWPYMILKSTVEA
4 2.95 1.23 2.356 3.333 2.042 2.055 2.86 3.76 1.635 0.237 1.498 1.418 0.475 1.502 3.221 2.564 1.204
0.0
 1.884 1.315
W
IM
5 0.926 0.191 1.034 1.043 0.76 0.466 0.773 1.148 1.672
0.0
 0.465 0.283 0.406 0.373 0.758 0.658 0.47 0.506 0.492 0.367
I
RKVFMLQTY
6 2.354 1.347 2.105 2.633 1.774 2.073 2.468 2.629 1.143 0.795 2.475 1.802 1.56
0.0
 1.549 2.06 2.155 1.108 0.436 2.729
F
Y
7 0.304
0.0
 0.314 0.512 0.443 0.466 0.313 0.555 0.343 0.245 0.198 0.088 0.109 0.229 0.515 0.337 0.345 0.292 0.272 0.205
R
KMLVFIYWAENSHTCQ
8 2.46
0.0
 2.194 2.43 2.233 2.703 2.638 2.448 2.033 1.471 2.097 1.97 1.752 1.999 3.763 2.254 1.967 2.036 0.544 1.786
R
9 4.865
0.0
 5.119 5.56 3.932 4.956 5.565 5.484 5.193 3.742 4.97 2.916 2.323 4.901 6.201 5.226 4.082 4.672 5.115 3.704
R


Binding energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 6.939 4.541 6.311 6.303 6.222 5.825 6.360 7.172 5.507 5.505 5.722 5.380 4.962 5.090 6.923 7.140 6.469 6.164 5.739 6.335
R
M
2 6.903 6.679 7.186 5.816 6.591 6.030 4.771 7.770 7.812 5.803 6.022 6.482 5.952 5.152 5.195 6.523 6.183 5.772 5.605 6.194
E
FP
3 6.943 6.448 7.123 7.058 7.054 7.148 6.918 7.112 7.014 6.754 6.754 6.849 6.692 6.554 6.636 6.886 6.891 6.559 6.640 6.894
R
FWPYMILKSTVEA
4 6.738 5.010 6.144 7.119 5.829 5.834 6.646 7.548 5.414 4.023 5.277 5.198 4.254 5.281 7.007 6.352 4.991 3.778 5.663 5.102
W
IM
5 6.943 6.206 7.051 7.059 6.777 6.483 6.789 7.165 7.689 6.017 6.481 6.300 6.422 6.390 6.775 6.675 6.487 6.520 6.509 6.383
I
RKVFMLQTY
6 6.738 5.730 6.488 7.017 6.157 6.457 6.852 7.013 5.526 5.171 6.857 6.186 5.943 4.383 5.933 6.443 6.538 5.491 4.819 7.113
F
Y
7 6.943 6.639 6.952 7.150 7.082 7.105 6.952 7.194 6.981 6.884 6.836 6.727 6.748 6.867 6.622 6.976 6.984 6.929 6.911 6.844
P
RKMLVFIYWANESHTCQ
8 7.041 4.581 6.723 7.010 6.814 7.265 7.218 7.028 6.614 6.051 6.663 6.550 6.332 6.580 7.214 6.835 6.547 6.617 5.124 6.366
R
9 6.735 1.868 6.989 7.429 5.802 6.825 7.435 7.354 7.062 5.609 6.827 4.757 4.168 6.771 6.569 7.095 5.947 6.410 6.985 5.573
R


Stability energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 14.778 12.954 14.479 15.169 14.343 14.123 14.606 14.983 14.024 14.478 14.632 13.759 13.942 14.844 14.973 15.145 14.593 15.792 14.858 15.013
R
2 14.888 15.118 15.633 14.155 15.017 14.612 12.890 16.177 15.425 15.120 14.971 14.970 15.168 14.412 13.241 14.817 14.565 15.546 14.170 15.188
E
P
3 14.836 15.130 15.579 15.299 15.406 15.640 15.176 15.596 15.562 15.849 15.581 14.238 15.510 15.235 14.364 15.118 15.184 16.048 14.903 15.741
K
P
4 13.627 12.411 13.496 14.642 12.915 13.162 14.129 14.896 12.844 11.597 13.037 12.768 11.838 13.181 14.503 13.476 11.880 12.263 12.766 12.610
I
MT
5 14.836 14.163 13.845 13.672 14.810 14.257 14.700 15.850 14.356 13.838 14.358 13.748 14.750 14.656 15.177 14.718 14.280 15.068 14.283 14.613
D
KINR
6 13.627 13.105 13.620 14.426 13.234 13.749 14.454 13.911 12.894 14.013 14.679 13.550 13.905 12.454 12.432 13.516 13.882 14.373 12.194 15.003
Y
PF
7 14.836 15.146 15.374 15.529 15.431 14.819 15.018 15.556 15.828 15.736 15.837 15.216 15.645 15.302 14.700 15.315 15.334 16.057 14.716 15.761
P
YQAER
8 14.835 12.494 13.605 14.719 14.330 14.451 14.847 14.881 14.541 14.281 14.638 14.134 14.616 14.686 16.722 14.772 14.572 15.018 13.576 14.735
R
9 13.622 9.329 14.504 14.853 12.906 14.390 15.026 14.449 13.567 13.645 15.016 11.955 12.244 15.710 15.301 14.402 13.341 15.533 15.012 13.674
R

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