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Help mscoring

 

One and three code letter for natural and phosphorylated amino acids.                           (Please read this help!)

ABP1_1OV32-29

Normalized sum of energies

 

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 0.512 0.056 0.342 0.36 0.942 0.75 0.374 0.585
0.0
 0.664 0.606 0.08 0.515 0.312 0.925 0.392 0.439 0.382 0.404 0.669
H
RKFNDEWSYT
2 2.178 2.378 0.444 2.982 1.787 1.165 2.622 2.703 3.551 0.575 1.246 1.039 1.629 2.268 1.938 1.477 0.719 0.83
0.0
 1.086
Y
N
3 1.701 0.094 1.575 1.988 1.693 0.816 1.811 1.793 4.092 0.555 0.068
0.0
 0.263 0.012 0.017 1.896 2.562 0.549 0.394 1.07
K
FPLRMY
4 0.107
0.0
 0.307 0.286 0.279 0.221 0.219 0.015 2.7 0.288 0.762 0.216 0.199 0.117 2.27 0.114 0.298 0.057 0.153 0.31
R
GWASFYMKEQCDITNV
5 0.553
0.0
 1.871 2.293 1.903 1.938 2.057 1.882 0.753 3.604 2.197 2.196 0.985 1.925 2.03 1.748 2.943 1.966 2.3 1.583
R
6 2.174 0.566 1.199 2.342 1.764 1.487 2.961 2.689
0.0
 0.79 1.822 0.643 3.983 0.619 0.56 1.615 1.712 1.39 1.031 1.932
H
7 0.424 0.058 0.548 0.739 0.369 0.595 0.679 0.59 0.773 0.501 0.402 0.087 0.372 0.355
0.0
 0.335 0.389 0.26 0.325 0.371
P
RKWYSFCVMTLA
8 6.017 3.456 4.152 6.901 6.188 4.722 6.628 6.258
0.0
 4.7 2.837 5.198 3.348 3.352 5.55 6.047 6.236 0.198 3.811 3.638
H
W
9 2.219 0.121 2.33 3.106 2.125 0.979 2.872 2.501 1.458 0.694 0.481 0.243
0.0
 1.55 0.694 2.252 2.297 1.97 1.866 1.655
M
RKL
10 0.86
0.0
 0.744 1.055 0.73 0.74 0.971 0.911 0.181 0.785 0.697 0.329 0.628 0.605 1.346 0.773 0.788 0.681 0.618 0.83
R
HK


Binding energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 12.422 11.962 12.252 12.270 12.852 12.660 12.284 12.495 11.909 12.571 12.516 11.989 12.425 12.217 12.835 12.303 12.349 12.290 12.313 12.580
H
RKFNDEWSYT
2 12.185 12.396 10.449 12.988 11.791 11.171 12.624 12.710 13.607 10.577 11.251 11.046 11.637 12.272 11.945 11.485 10.723 10.837 9.969 11.089
Y
N
3 12.092 10.477 11.963 12.376 12.085 11.205 12.200 12.232 14.531 10.928 10.457 10.389 10.644 10.394 10.407 12.279 12.904 10.938 10.776 11.450
K
FPLRMY
4 12.185 12.078 12.385 12.364 12.357 12.299 12.298 12.094 14.828 12.364 12.839 12.295 12.277 12.196 14.393 12.192 12.375 12.135 12.231 12.388
R
GWASFYMKEQCDITNV
5 12.095 11.534 13.414 13.831 13.493 13.522 13.594 13.422 12.296 15.195 13.752 13.788 12.567 13.512 13.570 13.290 14.533 13.553 13.887 13.172
R
6 12.143 10.530 11.161 12.306 11.732 11.452 12.925 12.659 9.962 10.752 11.786 10.609 13.995 10.579 10.528 11.577 11.679 11.349 10.991 11.896
H
7 12.422 12.055 12.547 12.737 12.367 12.592 12.677 12.589 12.771 12.499 12.399 12.084 12.361 12.353 11.997 12.330 12.387 12.257 12.323 12.369
P
RKWYSFMCVTLA
8 12.284 9.715 10.408 13.168 12.449 10.971 12.894 12.526 6.252 10.950 9.090 11.458 9.605 9.609 11.811 12.308 12.497 6.449 9.413 9.892
H
W
9 12.307 10.202 12.419 13.193 12.213 11.060 12.958 12.606 11.538 10.775 10.561 10.323 10.081 10.974 10.780 12.335 12.384 11.395 11.292 11.741
M
RKL
10 12.422 11.553 12.306 12.618 12.291 12.302 12.534 12.474 11.742 12.347 12.258 11.891 12.189 12.157 12.269 12.336 12.350 12.241 12.171 12.392
R
HK


Stability energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL optimum
1 34.923 34.504 35.040 34.630 35.008 34.687 35.202 34.969 33.923 35.973 36.009 34.615 35.973 35.694 35.553 34.182 34.221 36.505 35.260 35.894
H
ST
2 33.320 34.526 33.016 34.521 33.461 32.978 34.168 34.299 35.490 32.935 33.527 32.866 33.998 34.818 33.115 32.939 32.215 33.825 31.909 33.189
Y
T
3 33.377 31.708 33.512 33.380 33.840 32.333 33.261 34.216 36.008 33.689 32.807 31.615 32.404 32.352 31.306 33.645 34.771 33.486 31.923 33.889
P
KR
4 33.320 33.910 34.137 33.936 33.932 34.167 33.906 33.689 35.396 34.808 35.142 34.134 34.687 34.931 35.476 33.584 33.936 35.199 34.008 34.651
A
SG
5 33.255 33.294 34.875 35.048 34.862 34.491 34.966 34.876 34.026 37.227 35.690 35.507 34.582 35.617 34.808 33.779 35.073 36.244 35.199 35.161
A
R
6 33.283 32.258 33.102 34.074 33.289 33.329 34.546 34.147 31.907 33.242 34.138 32.359 36.371 32.854 31.301 32.329 33.492 34.476 32.822 34.395
P
7 34.923 35.173 35.650 35.702 35.335 35.745 35.684 35.673 34.822 36.267 35.913 35.244 36.359 35.490 34.177 34.358 35.308 35.965 34.962 35.840
P
S
8 34.796 32.470 33.520 36.225 34.970 34.211 35.859 35.506 29.693 34.568 32.627 34.644 33.350 33.415 34.059 34.370 34.827 30.894 32.493 34.021
H
9 34.816 33.299 35.503 36.450 35.141 34.233 35.928 35.623 34.519 34.441 34.251 33.393 33.904 34.723 33.031 35.177 35.213 35.737 34.284 35.118
P
RK
10 34.923 34.542 34.343 35.441 34.904 34.750 35.337 35.195 33.839 35.964 35.613 34.645 35.439 35.405 36.437 34.562 35.155 36.173 34.720 35.718
H

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