ADAN database

Help mscoring

 

One and three code letter for natural and phosphorylated amino acids.                           (Please read this help!)

1JMQ2

Normalized sum of energies

 

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL PTR SEP TPO optimum
1 0.11 0.138 0.167 0.084 0.092 0.091 0.083 0.105 0.101 0.158 0.256 0.173
0.0
0.102 0.095 0.114 0.108 0.166 0.137 0.153 0.038 0.085 0.161
M
yEDsQCPHFGTASYRVIpWNKL
2 0.679 0.586 0.77 0.886 1.136 0.633 1.577 0.882 0.57 1.292 0.431 0.888 0.206
0.0
1.443 0.398 1.4 0.506 0.542 1.263 0.447 0.553 2.112
F
MSLy
3 0.432 0.424 0.816 0.108 1.341 0.882 0.145 0.36 0.93 0.839 1.154 0.58 0.498 0.598
0.0
0.553 1.163 0.735 0.648 0.779 0.641 0.367 1.544
P
DEGsRAM
4 1.679 1.689 1.132 2.104 0.923 0.996 1.594
0.0
0.801 5.151 4.94 1.43 2.135 2.111 0.272 0.378 2.945 1.444 2.062 3.489 2.323 2.766 13.452
G
PS
5 1.522 3.203 1.3 0.585 2.359 1.522 2.0 1.408 1.892 4.431 2.559 1.922 1.738 1.037
0.0
1.981 2.575 2.614 1.885 3.783 1.3 0.903 13.383
P
6 0.351 1.32 1.426 0.113 0.453 0.497 0.257 0.275 1.505 0.501 0.424 0.325 0.318 0.303 0.044 1.257 1.671 0.433 0.332 0.528 0.297
0.0
0.277
s
PDEGpyFMKYALWCQ
7 2.141 1.457 2.193 2.654 1.753 2.864 2.493
0.0
0.96 4.785 3.782 1.741 1.611 2.277 5.87 2.087 1.206 0.619 1.478 2.546 2.762 3.093 10.287
G
8 0.562 0.511 1.978 0.596 1.736 1.536 0.097 0.369 1.513 1.265 0.652 0.514 0.124 0.05 0.063 0.973 0.613
0.0
0.124 0.949 0.058 0.862 2.061
W
FyPEMYG
9 2.712 1.785 2.632 1.641 2.471 3.53 0.347 2.235 2.372 2.283 1.534 2.562 2.514 2.147 2.488 3.387 1.354 1.758 2.464 2.6 0.918
0.0
1.496
s
E
10 0.252 0.323 0.217 0.044 1.764 0.229
0.0
0.22 0.293 0.163 0.185 0.26 0.229 0.23 0.513 1.204 1.317 0.229 0.228 0.174 0.197 0.076 0.043
E
pDsIVLyNGYQMWFAKHR


Binding energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL PTR SEP TPO optimum
1 26.481 26.490 26.500 26.478 26.486 26.485 26.478 26.512 26.495 26.468 26.628 26.482 26.265 26.402 26.489 26.472 26.493 26.380 26.403 26.515 26.337 26.478 26.471
M
yWFYIpSDEsAKQCPRTHNGVL
2 26.512 26.379 26.599 26.720 26.081 26.444 26.496 26.729 26.396 26.198 25.358 25.815 25.108 24.942 27.290 26.239 26.335 26.328 25.414 26.182 26.260 26.309 26.487
F
MLY
3 26.512 26.441 26.888 26.192 27.366 26.923 26.214 26.454 26.980 26.841 27.241 26.644 26.588 26.654 26.000 26.625 27.179 26.790 26.699 26.766 26.695 26.294 26.756
P
DEsRG
4 26.554 26.555 25.932 26.977 25.798 25.836 26.449 25.216 25.620 29.513 29.475 26.287 26.949 26.626 25.155 25.215 27.802 26.244 26.771 28.352 26.996 27.467 35.026
P
SGH
5 26.563 26.796 26.334 25.622 27.393 26.556 27.028 26.379 26.931 28.497 27.582 26.960 26.704 25.958 25.026 26.988 27.505 25.791 26.854 28.099 26.198 25.850 34.018
P
6 26.512 27.296 27.461 26.310 26.509 26.688 26.449 26.498 27.552 26.629 26.605 26.524 26.518 26.495 26.215 27.381 27.825 26.632 26.524 26.616 26.489 26.199 26.449
s
PDEpyFGCAMKYLVIWQ
7 26.562 25.100 26.520 26.802 26.240 26.960 26.612 25.023 24.841 28.511 24.610 24.998 24.667 24.200 29.120 26.538 25.372 24.135 25.128 26.704 25.355 26.561 28.799
W
FL
8 26.510 26.280 27.966 26.589 27.735 27.424 25.686 26.340 27.030 26.583 26.602 26.500 26.113 25.982 25.844 26.982 26.518 25.782 26.058 26.557 25.989 26.394 26.956
E
WPFyYM
9 26.461 25.430 26.385 25.387 26.228 27.260 24.065 26.038 26.146 25.946 26.126 26.277 26.198 25.822 26.721 27.027 25.993 25.502 26.181 26.263 24.645 23.438 24.449
s
10 26.525 26.583 26.508 26.336 27.965 26.521 26.290 26.512 26.586 26.440 26.463 26.553 26.518 26.522 26.362 27.465 27.489 26.520 26.521 26.457 26.488 26.366 26.287
p
EDPsIVLyNGMWQYFAKRH


Stability energies

# ALA ARG ASN ASP CYS GLN GLU GLY HIS ILE LEU LYS MET PHE PRO SER THR TRP TYR VAL PTR SEP TPO optimum
1 118.964 119.532 119.267 119.226 119.198 119.347 119.308 118.978 119.398 119.956 120.091 119.393 119.856 120.298 119.179 119.118 119.214 120.575 119.498 119.765 119.302 119.338 119.508
A
GSPCTDNyEsQKH
2 118.978 119.456 119.588 119.559 118.969 119.470 119.254 119.663 119.479 120.166 119.230 119.050 119.128 118.835 120.689 118.872 119.376 120.664 118.633 119.769 119.154 119.172 120.259
Y
FSCAKM
3 118.978 118.943 118.835 118.283 119.429 119.335 119.080 119.288 118.893 120.779 120.768 119.480 120.205 120.547 118.222 118.291 119.146 121.232 119.761 120.462 119.786 118.426 119.882
P
DSs
4 119.041 119.702 117.830 119.879 118.783 118.674 119.237 117.890 117.647 123.653 123.201 119.271 120.660 120.589 117.427 116.698 119.650 120.669 119.806 121.906 119.938 120.602 132.365
S
5 119.363 120.413 119.204 117.954 119.910 120.171 120.177 119.403 119.768 124.272 121.691 120.354 120.924 120.177 117.546 119.475 121.368 120.823 120.442 123.245 119.625 118.053 131.726
P
D
6 118.978 119.032 118.352 118.918 119.149 119.373 119.073 119.109 118.490 120.483 119.876 119.353 120.001 120.219 118.563 118.204 118.636 120.873 119.428 120.162 119.423 119.241 120.383
S
NHPT
7 119.042 119.444 118.395 118.758 118.678 119.264 120.532 117.070 118.722 124.280 119.084 119.153 119.530 118.763 124.347 118.232 118.235 119.339 118.957 120.839 120.091 121.664 128.671
G
8 119.302 119.737 117.421 118.331 119.142 120.446 117.531 118.736 119.942 121.240 120.915 120.021 120.031 120.657 119.063 118.629 119.661 120.962 119.966 120.591 119.861 119.068 120.346
N
E
9 118.964 118.274 117.995 118.038 119.078 118.675 116.814 118.521 118.949 119.990 120.091 119.217 119.767 119.843 119.844 118.342 117.277 119.730 119.286 119.788 117.754 116.566 118.322
s
E
10 118.700 119.272 118.973 118.760 118.845 119.073 118.811 118.978 119.177 119.888 119.728 119.153 119.739 120.043 119.614 118.100 118.035 120.380 119.194 119.665 119.278 119.165 119.579
T
S

footer

    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER