ADAN database

 

Scanning Information, ROC parameters and
Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: SHO1_1QKX-23.PDB
Scoring matrix: SHO1_1QKX-23_mat
Uniprot code: P40073
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 11.15
Foldx random average score for Saccharomyces cerevisiae: 11.907

Available information for P40073 in MINT (Nov 2008):
Nš of interacting proteins: 56
 Proteins belonging to other specie: 0
Nš of interactions described: 68
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having weird amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2186557
Proteins after random average filtering: 5078
 Total fragments: 1209836
Proteins after disorder filtering: 3418
 Total fragments: 90100
Proteins after pattern filtering: 1522
 Total fragments: 6649
Proteins after MINT filtering: 23
 Total fragments: 196

ROC parameters:
TPR= 0.411
FPR= 0.298
ACC= 0.698
SPC= 0.702
MCC= 0.026

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAA

11.15

-0.72

0.00

Best peptides

GKIRPWM

0.00

0.88

1.60

         
Interactors      
Q06604

GPRMPSR

4.08

-2.28

-1.56

LPTRPNK

6.76

-1.89

-1.17

KGPRMPS

6.95

-2.25

-1.53

P24583

LPPQPRK

6.35

-3.24

-2.52

Q06412

NSPKSPR

7.68

-2.40

-1.68

FSPNSPK

9.60

-2.27

-1.55

SPKSPRD

9.67

-0.14

0.58

P40036

PPLSPKS

10.00

-1.27

-0.55

P09620

PISKPSI

7.42

-1.50

-0.78

NPISKPS

9.65

-0.63

0.09

PDPSNIP

9.69

-2.04

-1.32

P13186

LPEREPP

5.87

-3.74

-3.02

IPAALPP

7.63

-3.58

-2.86

IPMSPNY

8.31

-1.76

-1.04

P32334

SSPSSPT

11.40

-0.95

-0.23

SPSSPTT

11.46

-0.08

0.64

P39083

QSPATPS

10.31

-2.49

-1.77

P38753

LPIQHPT

7.18

-1.78

-1.06

TPVMPPQ

8.88

-2.28

-1.56

YPSNLPI

9.71

-0.44

0.28

Q08229

PLPSTPN

11.03

-1.26

-0.54

TPVQPGG

11.34

0.28

1.00

Q00246

NLPRLPT

7.71

-1.75

-1.03

LPESPGT

10.06

-2.21

-1.49

P32448

DSPQLPS

10.35

-0.80

-0.08

PTDSPQL

10.87

-2.78

-2.06

RVPTDSP

11.87

-1.59

-0.87

Q04439

SKPKEPM

6.12

-2.55

-1.83

KKPAPPP

6.95

-4.04

-3.32

GSPSELP

7.01

-2.90

-2.18

P35197

TPAKPPQ

6.52

-2.46

-1.74

RPDHLPP

7.33

-1.58

-0.86

STPAKPP

9.65

-2.97

-2.25

Q12446

GAPAPPP

6.38

-3.70

-2.98

PPPRRGP

6.54

-3.06

-2.34

GQPAVPL

6.68

-2.98

-2.26

P08018

RAPRRPL

4.64

-3.46

-2.74

APRRPLS

6.34

-1.01

-0.29

HPTRPNV

6.81

-0.91

-0.19

P39969

SPRRAPK

6.26

-1.91

-1.19

QPPKSPL

6.43

-3.12

-2.40

VSPRRAP

6.43

-1.28

-0.56

Q03790

GFPSAPQ

7.81

-1.92

-1.20

FPSAPQP

8.65

-3.44

-2.72

KPTATPS

10.12

-1.96

-1.24

P41809

SPSAPAA

10.51

-1.44

-0.72

SPSAPVA

10.92

-1.11

-0.39

PYPSPNS

11.30

-1.61

-0.89

Q05080

KPDKPRP

5.45

-3.50

-2.78

QKPDKPR

10.01

0.16

0.88

P25344

PGPSPNE

11.13

-1.04

-0.32

NTPGPSP

11.75

-1.53

-0.81

P53297

HPSMPQM

5.55

-2.31

-1.59

GFPMGGP

6.06

-2.81

-2.09

LPPKPIS

6.80

-2.84

-2.12

P22147

HPLHPHQ

5.36

-1.63

-0.91

LHPHQMP

6.94

-1.30

-0.58

TPPHPMN

7.07

-1.64

-0.92

 


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