ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: SDC25_1OV32-21.PDB
Scoring matrix: SDC25_1OV32-21_mat
Uniprot code: P14771
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 21.23
Foldx random average score for Saccharomyces cerevisiae: 19.692

Available information for P14771 in MINT (Nov 2008):
Nš of interacting proteins: 2
 Proteins belonging to other specie: 0
Nš of interactions described: 2
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199120
Proteins after random average filtering: 7178
 Total fragments: 2082775
Proteins after disorder filtering: 4529
 Total fragments: 98461
Proteins after pattern filtering: 1820
 Total fragments: 5161
Proteins after MINT filtering: 1
 Total fragments: 6


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

21.23

0.41

0.00

Best peptides

EEKIGRPELD

0.00

-0.77

-1.18

         
Interactors      
P40450

PPLPESLSMN

16.29

-3.32

-3.72

SSPKLFPRLS

17.99

-2.48

-2.88

PPPPLPQSLL

18.70

-3.92

-4.33

 


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