ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: RVS167_FYN-SSH-1.PDB
Scoring matrix: RVS167_FYN-SSH-1_mat
Uniprot code: P39743
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 21.65
Foldx random average score for Saccharomyces cerevisiae: 17.934

Available information for P39743 in MINT (Nov 2008):
Nš of interacting proteins: 118
 Proteins belonging to other specie: 1
Nš of interactions described: 305
 Interactions with other species: 1

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2171208
Proteins after random average filtering: 5078
 Total fragments: 929361
Proteins after disorder filtering: 2961
 Total fragments: 41215
Proteins after pattern filtering: 1471
 Total fragments: 8561
Proteins after MINT filtering: 44
 Total fragments: 590


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

21.65

-5.14

0.00

Best peptides

RMRMKWRRRR

0.00

-7.83

-2.69

         
Interactors      
Q06604

RVKPAPPVSR

10.97

-8.74

-3.60

KGPRMPSRGR

12.11

-5.90

-0.76

EKGPRMPSRG

12.63

-8.86

-3.72

Q12365

VKDIPGKFPS

15.36

-5.77

-0.63

QIPFIPPQED

15.78

-9.49

-4.35

DIPGKFPSPL

16.23

-8.43

-3.29

P40072

LDAAPPTTKP

17.93

-6.34

-1.20

P43603

QGRFTAPTSP

15.21

-9.32

-4.18

GRFTAPTSPS

16.52

-7.10

-1.96

P53901

SGLNSPKLPP

13.96

-5.98

-0.84

YNQPPLPPIP

14.57

-10.39

-5.25

HNYNQPPLPP

14.60

-8.57

-3.43

Q12242

TKPCDVPNNG

16.51

-7.36

-2.22

P38266

RMQPQPPQPM

9.60

-9.11

-3.97

FLPPPKPFRH

10.08

-9.29

-4.15

RSLKDPKSFP

11.19

-6.84

-1.70

P15891

RRATPEKKPK

8.58

-9.07

-3.93

RSSAAPPPPP

12.28

-8.58

-3.44

SAAPPPPPRR

13.45

-8.01

-2.87

P53169

IMPTLPPRPY

12.00

-10.51

-5.37

PIMPTLPPRP

15.50

-10.53

-5.39

SVPIMPTLPP

15.59

-8.54

-3.40

P39692

KLPPSPKQPV

12.96

-8.80

-3.66

VMKLPPSPKQ

13.18

-8.98

-3.84

MKLPPSPKQP

13.47

-9.80

-4.66

P17555

SKSGPPPRPK

13.80

-8.51

-3.37

KSGPPPRPKK

14.54

-10.28

-5.14

SGPPPRPKKP

15.35

-7.99

-2.85

Q12344

PKLPPRGKQR

14.70

-7.04

-1.90

TSSPPLPPRQ

15.55

-7.68

-2.54

ATSTSPKLPP

16.17

-8.37

-3.23

P53316

MMPMFPSFGF

11.49

-10.12

-4.98

FIPQVPPVPY

12.51

-10.32

-5.18

FGFIPQVPPV

13.12

-5.64

-0.50

P08458

VMTNLPKRKP

13.03

-10.95

-5.81

MTNLPKRKPP

13.20

-10.75

-5.61

PKRKPPKLQG

13.95

-8.60

-3.46

P13186

FKAPSYVPNR

10.76

-8.75

-3.61

NSSIPMSPNY

13.86

-6.41

-1.27

RNSSIPMSPN

14.19

-7.19

-2.05

P40325

SLPWTYPPRF

11.74

-10.20

-5.06

QSQPPRPPRP

14.23

-7.53

-2.39

SQPRPPPRPQ

14.26

-7.51

-2.37

P07278

KTSTPPLPMH

15.83

-7.49

-2.35

TSTPPLPMHF

17.58

-6.64

-1.50

P47129

RKPNPPPNRS

10.38

-9.26

-4.12

NRKPNPPPNR

12.65

-11.16

-6.02

TLPNRKPNPP

14.36

-10.86

-5.72

P47029

ILPRDPPSYK

12.63

-9.62

-4.48

ESSILPRDPP

13.64

-9.06

-3.92

RPNSKHPTPP

14.82

-7.09

-1.95

Q12168

RGPPPLPPRA

10.63

-7.15

-2.01

NRGPPPLPPR

13.71

-9.90

-4.76

NKVQHPVPKP

14.84

-9.12

-3.98

Q03780

KRSRPPPPPM

10.55

-10.60

-5.46

KIKRSRPPPP

12.66

-10.36

-5.22

RSRPPPPPMD

13.03

-7.42

-2.28

Q12496

PSNIPKKRPF

14.10

-5.76

-0.62

IPSNIPKKRP

16.57

-8.19

-3.05

SNIPKKRPFL

16.79

-6.15

-1.01

P32793

HGPTHPSNMS

14.55

-4.84

0.30

GHGPTHPSNM

15.56

-6.11

-0.97

P36006

NIPIPPPPPP

14.12

-10.15

-5.01

SKSNKKPKNP

14.32

-8.07

-2.93

KSNKKPKNPG

15.38

-6.81

-1.67

P32790

EGPPPAMPAR

14.95

-5.92

-0.78

TGGTTVPAAP

16.46

-6.13

-0.99

IKPPRPTSTT

16.66

-7.26

-2.12

Q08412

KKWQPLPPEP

12.83

-11.70

-6.56

TKKKWQPLPP

14.34

-8.39

-3.25

GKDIELPTQP

14.69

-10.67

-5.53

Q06440

KKDRTPKVEP

10.61

-10.24

-5.10

DRTPKVEPSK

17.54

-7.35

-2.21

P38750

HLGLPHNLPH

10.73

-11.85

-6.71

RSPPGVFPVR

12.56

-6.67

-1.53

LRSPPGVFPV

15.71

-8.51

-3.37

P26570

LLWSDPTDSP

13.61

-8.66

-3.52

PKSPILKTNN

16.21

-7.30

-2.16

P31374

FRKTKPPPPL

11.74

-12.50

-7.36

RKTKPPPPLD

12.54

-8.52

-3.38

YGNNISPERP

13.41

-6.58

-1.44

P38237

DLNDPFVPPP

14.30

-9.35

-4.21

FVPPPNVPKK

14.83

-10.11

-4.97

FQIPSKPENT

15.90

-7.70

-2.56

P34223

EQPMPDNEPK

15.80

-4.93

0.21

PMPDNEPKQG

16.58

-7.40

-2.26

GLEVTDPSDP

17.53

-10.46

-5.32

P53933

RRRPPPPPIP

9.14

-12.12

-6.98

RTRRRPPPPP

10.68

-9.88

-4.74

RVAPPPLPNR

11.03

-9.19

-4.05

P33400

YVQPPNAPSY

15.61

-9.77

-4.63

ILPPLPVGIS

16.24

-8.41

-3.27

HSTSPQILPP

16.60

-6.27

-1.13

Q04439

RHSKKPAPPP

11.25

-8.73

-3.59

RQANIPPPPP

11.89

-9.03

-3.89

QANIPPPPPP

13.69

-9.10

-3.96

P33338

ARTPARTPTP

15.88

-7.44

-2.30

ARTPTPTPPV

15.92

-8.47

-3.33

PLSWSGPLTP

16.95

-9.57

-4.43

Q12446

RLPAPPPPPR

8.09

-9.57

-4.43

RGPAPPPPPR

8.70

-6.36

-1.22

RGPAPPPPPH

9.36

-6.06

-0.92

Q04322

HGNATPSKSP

14.10

-5.07

0.07

KNDQAPLDRP

14.50

-8.14

-3.00

STPPTLPPRR

15.82

-7.52

-2.38

P38990

RNQNLPKIPN

12.78

-7.03

-1.89

SRNQNLPKIP

14.50

-12.39

-7.25

NLPSAPSSTR

14.78

-7.90

-2.76

P32190

RRPSTAPARE

11.35

-9.52

-4.38

SGLRRPSTAP

14.63

-6.20

-1.06

GLRRPSTAPA

16.14

-6.36

-1.22

P25693

ENRPIPTIKP

17.11

-7.65

-2.51

P25558

RHPKSPVKKP

10.86

-9.07

-3.93

ELPNTPRSIN

14.70

-8.77

-3.63

PKSPVKKPMT

15.17

-7.13

-1.99

P37370

LAPLPPPPPP

12.67

-10.33

-5.19

QNRPHMPSVR

12.82

-9.07

-3.93

VSQMPKPRPF

13.18

-8.04

-2.90

Q02209

YKGPESKPNV

14.03

-6.85

-1.71

KGPESKPNVN

16.44

-5.84

-0.70

 


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