ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: RVS167_FMK-SSH-28.PDB
Scoring matrix: RVS167_FMK-SSH-28_mat
Uniprot code: P39743
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 16.55
Foldx random average score for Saccharomyces cerevisiae: 13.642

Available information for P39743 in MINT (Nov 2008):
Nš of interacting proteins: 118
 Proteins belonging to other specie: 1
Nš of interactions described: 305
 Interactions with other species: 1

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2171208
Proteins after random average filtering: 5078
 Total fragments: 1021424
Proteins after disorder filtering: 2891
 Total fragments: 34471
Proteins after pattern filtering: 1409
 Total fragments: 7147
Proteins after MINT filtering: 45
 Total fragments: 529


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

16.55

-2.33

0.00

Best peptides

RRTMWPMKRM

0.00

-9.81

-7.48

         
Interactors      
Q06604

KPLLPTRPNK

8.36

-8.69

-6.36

KPTPPSPPAK

9.39

-8.73

-6.40

NEEKPLLPTR

9.79

-7.79

-5.46

Q12365

IPGKFPSPLT

9.90

-6.27

-3.94

IVPREPLRNE

11.28

-6.55

-4.22

IPFIPPQEDD

11.71

-7.21

-4.88

P40072

PPTTKPGTNS

12.73

-7.12

-4.79

PTTKPGTNSK

13.13

-6.64

-4.31

P43603

RFTAPTSPST

11.76

-5.10

-2.77

P32628

EPPIAPESAT

12.86

-6.76

-4.43

Q04322

TPPTLPPRRI

11.28

-8.94

-6.61

DQAPLDRPQL

12.30

-5.36

-3.03

TSPPLPPRAD

12.49

-5.83

-3.50

P38266

LPPPKPFRHT

8.59

-9.33

-7.00

QPPPKPFRRS

8.59

-8.65

-6.32

MPPPKPFRHG

8.61

-8.24

-5.91

P15891

RATPEKKPKE

9.60

-5.35

-3.02

RRATPEKKPK

10.28

-6.93

-4.60

QPPLPSRNVA

10.50

-8.59

-6.26

P53169

ANSVPIMPTL

11.35

-6.09

-3.76

IMPTLPPRPY

11.66

-7.51

-5.18

VPIMPTLPPR

11.83

-8.65

-6.32

P39692

PPSPKQPVIM

10.55

-8.85

-6.52

LPPSPKQPVI

11.45

-8.00

-5.67

PSPKQPVIMS

12.38

-4.00

-1.67

P17555

KSGPPPRPKK

9.64

-6.88

-4.55

PRPKKPSTLK

9.69

-7.57

-5.24

RPKKPSTLKT

9.79

-8.37

-6.04

Q12344

TSPKLPPRGK

10.53

-6.01

-3.68

PPLPPRQNVA

11.74

-8.12

-5.79

PKLPPRGKQR

11.90

-6.43

-4.10

Q03780

RPPPPPMDMK

6.30

-9.95

-7.62

RSRPPPPPMD

10.41

-6.65

-4.32

KRSRPPPPPM

11.01

-7.90

-5.57

P53316

MMPMFPSFGF

8.97

-7.31

-4.98

MPMFPSFGFI

10.72

-7.35

-5.02

IPPQNPAANH

11.88

-6.84

-4.51

P32190

RRPSTAPARE

10.92

-5.70

-3.37

LRRPSTAPAR

12.72

-6.12

-3.79

RPSTAPARET

13.11

-6.24

-3.91

P13186

PLPEREPPTY

9.52

-7.10

-4.77

IPAALPPSDM

10.43

-8.10

-5.77

NSSIPMSPNY

10.82

-4.75

-2.42

P40325

RPPRPAANLA

9.36

-8.77

-6.44

QPPRPPRPAA

10.08

-8.58

-6.25

LPWTYPPRFY

10.22

-7.74

-5.41

P07278

KTSTPPLPMH

12.05

-7.21

-4.88

TSTPPLPMHF

12.42

-5.42

-3.09

P47129

RKPNPPPNRS

8.50

-9.00

-6.67

PPLLPPRNTM

9.95

-9.26

-6.93

GPPLLPPRNT

10.52

-6.17

-3.84

P47029

HPTPPSLKAS

10.25

-7.40

-5.07

YDGHPASFPK

11.47

-5.66

-3.33

KLPNLPNDAN

11.55

-5.47

-3.14

Q12168

RGPPPLPPRA

10.05

-6.53

-4.20

DDPYFPQFRS

10.39

-4.61

-2.28

GPPPLPPRAN

11.15

-7.59

-5.26

P08458

NLPKRKPPKL

9.51

-7.59

-5.26

LPKRKPPKLQ

9.82

-7.47

-5.14

PKRKPPKLQG

11.47

-6.54

-4.21

Q12496

SNIPKKRPFL

13.10

-5.17

-2.84

PSNIPKKRPF

13.59

-5.00

-2.67

EIPSNIPKKR

13.63

-5.37

-3.04

P36006

IPPPPPPMGQ

10.98

-8.66

-6.33

KKPKNPGGLS

11.70

-6.05

-3.72

PKDPKFEAAY

11.91

-6.75

-4.42

P32790

IKPPRPTSTT

9.79

-7.63

-5.30

PPAMPARPTA

10.21

-8.26

-5.93

PPIKPPRPTS

11.10

-7.45

-5.12

Q08412

VPPQLPTRTK

9.59

-7.97

-5.64

EDVPPQLPTR

9.80

-7.63

-5.30

KKKWQPLPPE

11.23

-4.92

-2.59

Q06440

DRTPKVEPSK

10.40

-6.48

-4.15

P38750

RSPPGVFPVR

9.19

-7.00

-4.67

PPGVFPVRGM

10.65

-7.95

-5.62

LGLPHNLPHN

12.17

-5.98

-3.65

P26570

YSTPLNSPGL

10.40

-6.08

-3.75

PKSPILKTNN

10.87

-5.37

-3.04

TPSKPNLEVN

10.94

-7.07

-4.74

P31374

RKTKPPPPLD

7.29

-6.75

-4.42

ISPERPSFRQ

9.80

-6.34

-4.01

TKPPPPLDFE

10.58

-6.57

-4.24

P38237

IPSKPENTVN

10.77

-7.29

-4.96

FVPPPNVPKK

10.82

-7.62

-5.29

NDPFVPPPNV

11.44

-6.20

-3.87

P34223

EQPMPDNEPK

13.08

-6.80

-4.47

P53118

NPHDLPSHLG

12.76

-5.28

-2.95

VENPHDLPSH

12.80

-6.89

-4.56

P53933

RVAPPPLPNR

8.53

-8.31

-5.98

RPPPPPIPST

8.77

-9.03

-6.70

RRPPPPPIPS

10.90

-7.13

-4.80

P33400

ILPPLPVGIS

10.68

-6.65

-4.32

PQILPPLPVG

12.04

-6.42

-4.09

YVQPPNAPSY

12.22

-7.80

-5.47

Q04439

RPSPPTAATR

9.38

-8.38

-6.05

APPPPGMQNK

9.51

-9.28

-6.95

KKPAPPPPGM

9.74

-8.08

-5.75

P33338

RTPTPTPPVV

11.77

-6.30

-3.97

VTPARTPART

11.91

-5.96

-3.63

RTPARTPTPT

12.64

-4.90

-2.57

Q12446

RPLPQLPNRN

7.82

-7.17

-4.84

RPVPPPPPMR

8.47

-9.29

-6.96

NRPLPQLPNR

8.55

-7.79

-5.46

P39940

DDPRLPSSLD

11.13

-5.75

-3.42

WDDPRLPSSL

11.29

-7.00

-4.67

P53901

MRPIPPLPTE

6.88

-8.73

-6.40

NDPIILPPTF

8.65

-7.30

-4.97

LPPIPTRDDM

9.16

-9.84

-7.51

P38990

NQNLPKIPNS

11.51

-5.83

-3.50

NQPSPIRPVL

11.87

-6.08

-3.75

RNQNLPKIPN

12.04

-5.96

-3.63

P25333

YPEGAPTSGA

12.69

-6.56

-4.23

P25558

SPVKKPMTSE

10.42

-6.93

-4.60

PNTPRSINVT

10.84

-4.90

-2.57

KSPVKKPMTS

10.99

-5.54

-3.21

P37370

MPKPRPFQNK

7.51

-9.18

-6.85

RPSPISPSIN

8.93

-9.53

-7.20

LPPPPPPSVA

9.71

-8.96

-6.63

Q02209

YKGPESKPNV

10.50

-5.02

-2.69

GPESKPNVNF

12.47

-6.13

-3.80

PESKPNVNFM

12.86

-6.79

-4.46

 


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