ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: RVS167_FMK-SSH-21.PDB
Scoring matrix: RVS167_FMK-SSH-21_mat
Uniprot code: P39743
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 16.23
Foldx random average score for Saccharomyces cerevisiae: 14.313

Available information for P39743 in MINT (Nov 2008):
Nš of interacting proteins: 118
 Proteins belonging to other specie: 1
Nš of interactions described: 305
 Interactions with other species: 1

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
 Total fragments: 2171208
Proteins after random average filtering: 5078
 Total fragments: 1293844
Proteins after disorder filtering: 3031
 Total fragments: 47534
Proteins after pattern filtering: 1169
 Total fragments: 2989
Proteins after MINT filtering: 43
 Total fragments: 171


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAGGAAAA

16.23

-0.36

0.00

Best peptides

RWRLGHPHMT

0.00

0.85

1.21

         
Interactors      
Q06604

PLLPTRPNKA

10.78

-3.01

-2.65

PTRPNKAEVT

11.98

-1.25

-0.89

EKGPRMPSRG

12.13

-1.73

-1.37

Q12365

QIPFIPPQED

12.00

-2.44

-2.08

IVPREPLRNE

13.56

-2.12

-1.76

P40072

PPTTKPGTNS

13.47

-1.82

-1.46

NTPSASPMLD

14.05

-3.31

-2.95

P43603

FTAPTSPSTS

13.93

-1.52

-1.16

P08458

LPKRKPPKLQ

10.30

-2.70

-2.34

VTPITNPSSS

14.24

-1.58

-1.22

Q12532

PFKPYINGGD

14.12

-1.59

-1.23

P53901

DPIILPPTFS

9.45

-4.11

-3.75

PPIPTRDDMS

11.62

-2.41

-2.05

KLPPLPTTSN

12.63

-2.30

-1.94

Q04322

TPPTLPPRRI

12.37

-4.65

-4.29

ATPSKSPTSA

13.39

-0.51

-0.15

P38266

PLKPGQKTYT

8.84

-2.29

-1.93

NIYPIEPSLD

10.46

-2.43

-2.07

KKPPVVPKKK

10.69

-2.62

-2.26

P15891

ATPEKKPKEN

13.01

-2.11

-1.75

DEPEGEPDVK

13.07

-1.05

-0.69

TPSPAPAAKI

13.57

-1.87

-1.51

Q02209

KGPESKPNVN

14.05

-1.54

-1.18

P39692

PPSPKQPVIM

12.05

-3.11

-2.75

P17555

PRPKKPSTLK

10.05

-3.44

-3.08

PKKPSTLKTK

12.20

-1.63

-1.27

PPRPKKPSTL

12.44

-0.18

0.18

Q12344

PLPPRQNVAT

13.04

-2.36

-2.00

SSPPLPPRQN

13.60

-1.77

-1.41

P53316

WMMPMFPSFG

9.75

-2.12

-1.76

IIPPQNPAAN

13.65

-2.32

-1.96

MMPMFPSFGF

13.91

-4.14

-3.78

P32190

RRPSTAPARE

12.54

-2.29

-1.93

RPSTAPARET

13.35

-1.84

-1.48

P13186

PMSPNYGNQS

12.18

-2.23

-1.87

NIPLTPLATN

12.47

-3.41

-3.05

PLTPLATNTH

13.04

-1.79

-1.43

P40325

YVQPGDPRLG

8.92

-2.66

-2.30

LPWTYPPRFY

10.93

-3.63

-3.27

SRPHQRPSTM

11.49

-1.99

-1.63

P47129

GPPLLPPRNT

12.21

-2.07

-1.71

PLLPPRNTMK

14.00

-3.79

-3.43

P47029

LSPLGAPGNS

12.98

-2.38

-2.02

PNLPNDANLS

13.03

-2.75

-2.39

GHPASFPKET

13.29

-0.51

-0.15

Q12168

PNRPGGTTNR

10.94

-1.81

-1.45

NDDPYFPQFR

11.30

-1.29

-0.93

Q03780

DIPPRSPNRN

11.07

-2.93

-2.57

PRSPNRNAHS

13.67

-1.76

-1.40

Q12496

EIPSNIPKKR

10.56

-2.56

-2.20

P32793

HGPTHPSNMS

12.74

-3.74

-3.38

SLGHGPTHPS

13.71

-0.68

-0.32

GHGPTHPSNM

14.08

-0.95

-0.59

P36006

MGQPKDPKFE

10.13

-1.60

-1.24

NKKPKNPGGL

13.64

-1.80

-1.44

KKPKNPGGLS

14.11

-2.55

-2.19

P32790

APAPLDPFKT

12.59

-2.20

-1.84

PPRPTSTTSV

12.94

-1.61

-1.25

IKPPRPTSTT

13.23

-1.39

-1.03

Q08412

DVPPQLPTRT

9.82

-2.77

-2.41

ELPTQPVRKN

11.92

-4.24

-3.88

PLPPEPLDTT

12.35

-1.24

-0.88

P38750

GLPHNLPHNH

7.99

-2.35

-1.99

PILPRTTQDT

11.11

-1.47

-1.11

TFPHNAPASS

12.68

-1.60

-1.24

P26570

STPLNSPGLS

12.11

-3.84

-3.48

PSTPSKPNLE

12.31

-2.44

-2.08

PKSPILKTNN

12.70

-1.90

-1.54

P31374

FPNLDPTHSQ

9.99

-1.94

-1.58

NISPERPSFR

10.04

-1.76

-1.40

VFPNLDPTHS

10.43

-1.89

-1.53

P38237

FQIPSKPENT

11.15

-0.33

0.03

VPPPNVPKKD

11.85

-2.43

-2.07

QIPSKPENTV

13.13

-1.07

-0.71

P34223

PMPDNEPKQG

11.20

-2.48

-2.12

P53118

NPHDLPSHLG

10.45

-2.11

-1.75

ENPHDLPSHL

13.38

-0.70

-0.34

P53933

VSYPGNPTSR

11.06

-0.76

-0.40

PPPPIPSTQK

13.40

-2.59

-2.23

APPPLPNRQL

13.54

-2.71

-2.35

P33400

PTGPSLTEHL

12.59

0.08

0.44

Q04439

SSKPKEPMFE

11.97

-3.40

-3.04

PPPPGMQNKA

12.49

-2.41

-2.05

NNIPTPPQNR

12.93

-1.48

-1.12

P33338

VTPARTPART

12.22

-2.80

-2.44

Q12446

SLPPLPNQFA

11.69

-2.40

-2.04

ALPPASPEVR

11.72

-1.61

-1.25

RPLPQLPNRN

11.85

-2.45

-2.09

P39940

WDDPRLPSSL

14.22

0.42

0.78

P38990

PSAPSSTRLG

11.87

-2.14

-1.78

PNLPSAPSST

14.22

-0.34

0.02

P25333

KYPEGAPTSG

11.39

-2.41

-2.05

P25558

SPVKKPMTSE

13.40

-1.38

-1.02

PNTPRSINVT

13.41

-1.46

-1.10

EELPNTPRSI

13.63

-0.75

-0.39

P37370

KATPVPPTLA

11.10

-2.86

-2.50

SPSINPPKQS

11.82

-2.59

-2.23

FSAPSLPQQS

11.87

-1.32

-0.96

 


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