ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: PIN3_1ZX6-19.PDB
Scoring matrix: PIN3_1ZX6-19_mat
Uniprot code: Q06449
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.28
Foldx random average score for Saccharomyces cerevisiae: 16.163

Available information for Q06449 in MINT (Nov 2008):
Nš of interacting proteins: 38
 Proteins belonging to other specie: 0
Nš of interactions described: 44
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1075
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 6104
 Total fragments: 2757445
Proteins after random average filtering: 6104
 Total fragments: 1212213
Proteins after disorder filtering: 3864
 Total fragments: 58539
Proteins after pattern filtering: 1760
 Total fragments: 6848
Proteins after MINT filtering: 22
 Total fragments: 193


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

16.28

2.58

0.00

Best peptides

RRFMWGFHW

0.00

-3.89

-6.47

         
Interactors      
Q06604

PPSPPAKRI

12.77

-5.91

-8.49

GPRMPSRGR

12.81

-5.06

-7.64

EKGPRMPSR

13.07

-4.79

-7.37

P40325

PRPPPRPQQ

10.62

-4.11

-6.69

RPPRPAANL

11.03

-6.18

-8.76

PRPQQNPSL

13.10

-2.43

-5.01

Q04322

DQAPLDRPQ

13.45

-2.83

-5.41

QAPLDRPQL

15.75

-2.71

-5.29

Q12168

NDDPYFPQF

10.84

-3.96

-6.54

PPLPPRANV

11.21

-5.92

-8.50

VPNRPGGTT

13.12

-4.36

-6.94

P15891

RATPEKKPK

13.46

-2.61

-5.19

PPPPRRATP

13.76

-6.59

-9.17

PPPPPRRAT

13.99

-5.47

-8.05

Q12344

PPLPPRQNV

11.46

-6.16

-8.74

PKLPPRGKQ

14.10

-3.77

-6.35

TSSPPLPPR

15.91

-3.01

-5.59

P39521

VQTPHVPDR

15.50

-1.92

-4.50

AQPKPKPAQ

16.01

-2.18

-4.76

P24583

LPPQPRKHD

11.68

-5.51

-8.09

PPQPRKHDK

12.93

-4.53

-7.11

APLPPQPRK

14.11

-5.46

-8.04

Q08601

YAPPPGPPP

15.76

-5.10

-7.68

P19812

PIFRPGNIF

11.40

-5.66

-8.24

EPRPRRIPP

12.94

-6.23

-8.81

PRPRRIPPT

14.50

-1.78

-4.36

Q12412

PPPAYDPNH

15.02

-4.58

-7.16

AYDPNHRPP

16.15

-2.85

-5.43

Q08412

DVPPQLPTR

13.59

-4.40

-6.98

PPEPLDTTP

14.75

-4.71

-7.29

IELPTQPVR

15.11

-2.45

-5.03

P53118

NPHDLPSHL

14.75

-5.40

-7.98

P53933

PPLPNRQLP

13.74

-5.14

-7.72

VAPPPLPNR

14.23

-3.69

-6.27

PPPLPNRQL

14.46

-5.80

-8.38

Q12446

RPLPQLPNR

10.38

-5.64

-8.22

PPPPPHRHV

10.67

-7.14

-9.72

PPPPPRASR

12.23

-7.06

-9.64

P38266

PPKPFRHGL

11.08

-6.15

-8.73

PPKPFRRSQ

11.36

-5.61

-8.19

PPPPSRGNF

11.51

-6.41

-8.99

P40483

PSVPPRNYF

13.72

-3.92

-6.50

P07244

TSEMPGMYP

14.21

-3.21

-5.79

P40563

NSQPQGPSD

13.71

-0.22

-2.80

PPTPAGTPN

13.77

-2.37

-4.95

GMVNPGQLP

14.48

-3.81

-6.39

Q07533

PHFPYGTWK

10.11

-4.08

-6.66

NPLPPLPPL

12.25

-6.05

-8.63

DPHFPYGTW

13.07

-4.27

-6.85

P53901

RPIPPLPTE

12.83

-5.94

-8.52

YNQPPLPPI

13.53

-5.16

-7.74

LNSPKLPPL

13.59

-2.91

-5.49

P37254

GPGPGNPNN

16.05

-3.54

-6.12

 


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