ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: PIN3_1YNZ-4.PDB
Scoring matrix: PIN3_1YNZ-4_mat
Uniprot code: Q06449
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 19.92
Foldx random average score for Saccharomyces cerevisiae: 23.024

Available information for Q06449 in MINT (Nov 2008):
Nš of interacting proteins: 38
 Proteins belonging to other specie: 0
Nš of interactions described: 44
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1075
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 6104
 Total fragments: 2751341
Proteins after random average filtering: 6104
 Total fragments: 1335905
Proteins after disorder filtering: 3947
 Total fragments: 112857
Proteins after pattern filtering: 2022
 Total fragments: 19465
Proteins after MINT filtering: 25
 Total fragments: 560


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

19.92

4.13

0.00

Best peptides

IRPFKGRPPH

0.00

-4.21

-8.34

         
Interactors      
Q06604

PKPTPPSPPA

12.27

-3.49

-7.63

KNKPKPTPPS

12.28

-4.31

-8.45

VKPAPPVSRS

12.59

-3.89

-8.03

P24583

ANAPLPPQPR

10.21

-5.27

-9.40

ERANAPLPPQ

12.26

-4.79

-8.93

PLPPQPRKHD

14.26

-4.29

-8.43

P38260

LFGGGGPDDP

9.71

-5.44

-9.57

FGGGGPDDPT

16.50

-2.67

-6.80

Q04322

KNDQAPLDRP

13.11

-4.87

-9.00

SSSTPPTLPP

16.95

-2.19

-6.32

HGNATPSKSP

17.05

-1.51

-5.64

Q12168

NRGPPPLPPR

9.86

-5.54

-9.68

PNRPGGTTNR

11.57

-4.93

-9.06

VQHPVPKPNI

12.06

-4.60

-8.73

P15891

KKSFTPSKSP

10.55

-2.56

-6.70

IISPKPFSKP

10.95

-6.65

-10.79

PKPEVPEDEP

12.07

-4.37

-8.50

Q12344

ATSTSPKLPP

13.16

-2.86

-6.99

TTSSPPLPPR

13.57

-2.05

-6.18

PTTSSPPLPP

14.55

-4.93

-9.06

P39521

HVPDRPPSQL

12.26

-3.90

-8.04

DAQPKPKPAQ

14.92

-2.08

-6.21

QTPHVPDRPP

15.71

-2.55

-6.68

P40325

LYVQPGDPRL

11.32

-4.75

-8.88

PLYVQPGDPR

12.28

-3.92

-8.05

PRPPRPAANL

12.61

-4.63

-8.77

Q08601

YAPPPGPPPM

9.85

-6.44

-10.57

QRPMAPPPNQ

12.27

-5.21

-9.34

QQYAPPPGPP

13.34

-5.39

-9.52

P19812

PIFRPGNIFN

12.84

-4.26

-8.39

PRRIPPTDED

13.46

-6.51

-10.65

PQNPPPILQF

14.17

-3.17

-7.30

Q12412

PQPPPAYDPN

16.67

-3.19

-7.32

PNHRPPSSSE

16.71

-2.94

-7.07

AYDPNHRPPS

18.21

-0.52

-4.65

Q08412

KWQPLPPEPL

9.67

-3.92

-8.05

KKKWQPLPPE

10.63

-3.57

-7.71

GKNSRPQQPE

13.81

-3.40

-7.54

P53118

ESVENPHDLP

16.57

-1.77

-5.90

VENPHDLPSH

18.83

0.86

-3.27

PHDLPSHLGS

19.35

-2.13

-6.26

P38216

SRPSNPPPSS

13.61

-4.63

-8.77

SQYSRPSNPP

14.62

-4.29

-8.43

PSNPPPSSAH

15.05

-3.24

-7.38

P53933

RRRPPPPPIP

9.91

-7.68

-11.82

KRVAPPPLPN

10.03

-6.10

-10.23

AKRVAPPPLP

10.74

-4.99

-9.13

Q12446

VRLPAPPPPP

8.88

-7.37

-11.50

RLPAPPPPPR

9.30

-7.23

-11.37

HKAPPPPPPT

9.87

-5.50

-9.63

P38266

ILPAPGEPLS

9.03

-5.14

-9.27

KRAPTPPAPS

9.88

-6.34

-10.48

PKSFPPPPLK

9.89

-6.99

-11.13

P40483

SKPSVPPRNY

14.13

-2.84

-6.97

PASKPSVPPR

16.73

-2.78

-6.91

TKDAPASKPS

17.18

-2.27

-6.40

P07244

TSEMPGMYPP

13.98

-3.74

-7.88

ETSEMPGMYP

17.65

-1.99

-6.13

PGMYPPGHYD

19.65

-1.53

-5.67

P40563

KRRAPPPVPK

8.12

-6.65

-10.79

RRAPPPVPKK

10.91

-6.62

-10.75

PKRRAPPPVP

11.20

-6.10

-10.23

Q07533

MNNPLPPLPP

11.38

-6.29

-10.43

PHFPYGTWKG

12.52

-4.41

-8.54

PLPPLPPLPD

12.94

-6.09

-10.23

P53901

MRPIPPLPTE

11.13

-5.08

-9.21

HNYNQPPLPP

12.33

-6.21

-10.34

AMRPIPPLPT

12.47

-5.12

-9.25

P37254

IVVGPGPGNP

9.16

-6.47

-10.61

VGPGPGNPNN

13.52

-2.57

-6.71

VVGPGPGNPN

14.91

-3.20

-7.34

Q12489

SRPSAPPPGY

13.67

-6.70

-10.84

QSYSRPSAPP

15.38

-3.38

-7.51

KQSYSRPSAP

17.57

-3.10

-7.23

 


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