ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: PIN3_1YNZ-26.PDB
Scoring matrix: PIN3_1YNZ-26_mat
Uniprot code: Q06449
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 15.78
Foldx random average score for Saccharomyces cerevisiae: 13.302

Available information for Q06449 in MINT (Nov 2008):
Nš of interacting proteins: 38
 Proteins belonging to other specie: 0
Nš of interactions described: 44
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1075
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 6104
 Total fragments: 2757445
Proteins after random average filtering: 6104
 Total fragments: 1161063
Proteins after disorder filtering: 3939
 Total fragments: 83619
Proteins after pattern filtering: 1980
 Total fragments: 15420
Proteins after MINT filtering: 25
 Total fragments: 496


Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAA

15.78

-1.40

0.00

Best peptides

DEKRRMHPY

0.00

-6.13

-4.73

         
Interactors      
Q06604

EEKPLLPTR

6.09

-9.00

-7.60

SSPPPLPTR

7.49

-8.03

-6.63

EKGPRMPSR

7.60

-9.31

-7.91

P24583

PPQPRKHDK

7.82

-5.52

-4.12

APLPPQPRK

7.85

-5.44

-4.04

PLPPQPRKH

10.60

-3.77

-2.37

P38260

GGGPDDPTL

11.26

-3.81

-2.41

GGPDDPTLM

12.63

-0.80

0.60

Q04322

STPPTLPPR

7.34

-9.27

-7.87

TPPTLPPRR

8.42

-6.82

-5.42

TSPPLPPRA

9.21

-5.14

-3.74

P19812

PRPRRIPPT

8.12

-5.49

-4.09

HSPIFRPGN

9.27

-6.11

-4.71

RPRRIPPTD

9.45

-3.35

-1.95

P15891

AAPPPPPRR

8.15

-8.31

-6.91

SAAPPPPPR

8.19

-8.23

-6.83

KEPVKTPSP

8.52

-4.70

-3.30

Q12344

SPKLPPRGK

7.69

-3.92

-2.52

TSSPPLPPR

8.10

-8.05

-6.65

STSPKLPPR

8.23

-8.20

-6.80

P39521

HVPDRPPSQ

9.73

-3.95

-2.55

PHVPDRPPS

9.78

-6.49

-5.09

VQTPHVPDR

9.99

-7.16

-5.76

P40325

QSQPPRPPR

7.42

-7.66

-6.26

SLPWTYPPR

7.50

-7.58

-6.18

SSQPRPPPR

7.82

-8.13

-6.73

Q08601

APPPGPPPM

8.88

-5.69

-4.29

YNRPVYPPP

9.40

-6.86

-5.46

YQRPMAPPP

9.57

-6.74

-5.34

Q12532

PFKPYINGG

8.43

-5.20

-3.80

Q12168

RGPPPLPPR

6.93

-8.66

-7.26

DNDDPYFPQ

9.33

-2.67

-1.27

NDDPYFPQF

9.43

-5.05

-3.65

Q12412

RPPQPPPAY

6.63

-6.08

-4.68

YDPNHRPPS

9.86

-5.60

-4.20

PPPAYDPNH

10.05

-3.72

-2.32

Q08412

DVPPQLPTR

7.70

-8.33

-6.93

IELPTQPVR

8.50

-7.62

-6.22

KKKWQPLPP

10.31

-2.57

-1.17

P53118

ENPHDLPSH

9.82

-5.72

-4.32

PHDLPSHLG

11.18

-3.78

-2.38

VENPHDLPS

13.03

-2.88

-1.48

P38216

YSRPSNPPP

9.73

-6.89

-5.49

SRPSNPPPS

10.33

-3.95

-2.55

QYSRPSNPP

11.50

-3.46

-2.06

P53933

RRRPPPPPI

7.74

-5.01

-3.61

TRRRPPPPP

7.82

-4.60

-3.20

RTRRRPPPP

7.83

-4.23

-2.83

Q12446

APPPPPHRH

7.49

-5.66

-4.26

PAPPPPPRR

8.05

-8.61

-7.21

AAPPPPPAF

8.08

-5.98

-4.58

P38266

PPKPFRHGL

5.67

-6.47

-5.07

QPPPKPFRR

6.87

-7.31

-5.91

PPKPFRHTE

6.88

-5.79

-4.39

P40483

ASKPSVPPR

6.23

-8.57

-7.17

PSVPPRNYF

8.35

-5.92

-4.52

KPSVPPRNY

8.98

-3.52

-2.12

P07244

SEMPGMYPP

9.40

-4.81

-3.41

PGMYPPGHY

10.24

-4.76

-3.36

MPGMYPPGH

11.03

-4.34

-2.94

P40563

RAPPPVPKK

6.90

-6.05

-4.65

EVTPKVPER

9.02

-8.52

-7.12

KRRAPPPVP

9.98

-5.62

-4.22

Q07533

VKSDPHFPY

6.44

-3.93

-2.53

SSMPNSPKK

7.13

-5.34

-3.94

LVKSDPHFP

8.99

-3.80

-2.40

P53901

MAMRPIPPL

6.98

-5.64

-4.24

PPLPPIPTR

7.51

-8.64

-7.24

DPIILPPTF

7.62

-4.81

-3.41

Q12489

RPSAPPPGY

8.08

-5.28

-3.88

YSRPSAPPP

9.46

-5.42

-4.02

SRPSAPPPG

10.23

-5.08

-3.68

 


    Comments or questions on the site? Send a mail to adandatabase@umh.es                                                     
DISCLAIMER