|
Matrix information:
(Help)
ADAN-name: PIN3_1YNZ-17.PDB
Scoring matrix: PIN3_1YNZ-17_mat
Uniprot code: Q06449
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.18
Foldx random average score for Saccharomyces cerevisiae: 16.607 Available information for Q06449 in MINT (Nov 2008):
Nš of interacting proteins: 38
Proteins belonging to other specie: 0
Nš of interactions described: 44
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1075
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 6104
Total fragments: 2757445
Proteins after random average filtering: 6104
Total fragments: 1285529
Proteins after disorder filtering: 3945
Total fragments: 71907
Proteins after pattern filtering: 1796
Total fragments: 7333
Proteins after MINT filtering: 21
Total fragments: 188
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
15.18
|
2.52 |
0.00 |
| Best peptides |
RRFMGGRFQ |
0.00
|
-1.23 |
-3.75 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| P39521 |
AQPKPKPAQ |
11.94
|
-1.28 |
-3.80 |
| Q06604 |
LPTRPNKAE |
12.07
|
-1.06 |
-3.58 |
|
GPRMPSRGR |
12.45
|
-1.79 |
-4.31 |
|
PPSPPAKRI |
12.55
|
-3.65 |
-6.17 |
| P40325 |
RPPRPAANL |
8.82
|
-4.15 |
-6.67 |
|
PRPPPRPQQ |
9.91
|
-1.95 |
-4.47 |
|
YVQPGDPRL |
10.72
|
-4.25 |
-6.77 |
| P24583 |
LPPQPRKHD |
12.43
|
-2.75 |
-5.27 |
|
APLPPQPRK |
12.48
|
-2.86 |
-5.38 |
|
RANAPLPPQ |
12.98
|
-2.18 |
-4.70 |
| P07244 |
TSEMPGMYP |
11.99
|
-1.40 |
-3.92 |
| P53933 |
VAPPPLPNR |
12.65
|
-2.97 |
-5.49 |
|
PPPLPNRQL |
15.13
|
-1.56 |
-4.08 |
|
PPPPPIPST |
16.10
|
0.77 |
-1.75 |
| Q08601 |
YAPPPGPPP |
14.93
|
-2.21 |
-4.73 |
|
PGPPPMAYN |
15.86
|
0.14 |
-2.38 |
| P53901 |
RPIPPLPTE |
13.17
|
-1.51 |
-4.03 |
|
YNQPPLPPI |
14.61
|
-1.63 |
-4.15 |
|
MAMRPIPPL |
14.92
|
-0.89 |
-3.41 |
| P19812 |
PIFRPGNIF |
10.49
|
-4.18 |
-6.70 |
|
NSPEASPSL |
15.42
|
0.00 |
-2.52 |
|
PRPRRIPPT |
15.93
|
1.26 |
-1.26 |
| Q04322 |
PSKSPTSAV |
14.21
|
2.57 |
0.05 |
|
DQAPLDRPQ |
15.10
|
1.29 |
-1.23 |
|
NDQAPLDRP |
16.50
|
0.13 |
-2.39 |
| Q12412 |
PPPAYDPNH |
14.66
|
-2.85 |
-5.37 |
| P15891 |
PPPPPRRAT |
12.47
|
-1.20 |
-3.72 |
|
QPPLPSRNV |
13.22
|
-1.73 |
-4.25 |
|
KTPSPAPAA |
13.37
|
1.23 |
-1.29 |
| P40563 |
PTPAGTPNV |
12.33
|
-0.42 |
-2.94 |
|
RAPPPVPKK |
13.19
|
-1.76 |
-4.28 |
|
PSERPKRRA |
13.81
|
-1.11 |
-3.63 |
| Q12446 |
PPPPPHRHV |
10.30
|
-3.73 |
-6.25 |
|
RPLPQLPNR |
11.07
|
-3.23 |
-5.75 |
|
HSLPPLPNQ |
11.77
|
-1.48 |
-4.00 |
| P37254 |
PGNPNNGAQ |
14.17
|
-1.16 |
-3.68 |
|
GPGPGNPNN |
14.37
|
-3.21 |
-5.73 |
| Q08412 |
LPTQPVRKN |
14.96
|
-2.02 |
-4.54 |
|
IELPTQPVR |
15.00
|
-2.35 |
-4.87 |
|
QPLPPEPLD |
15.58
|
-0.20 |
-2.72 |
| Q12344 |
PPLPPRQNV |
11.01
|
-0.88 |
-3.40 |
|
PKLPPRGKQ |
12.49
|
-1.60 |
-4.12 |
| Q12168 |
PPLPPRANV |
10.92
|
-1.35 |
-3.87 |
|
VPNRPGGTT |
12.74
|
-0.83 |
-3.35 |
|
NDDPYFPQF |
13.27
|
-1.12 |
-3.64 |
| Q07533 |
VKSDPHFPY |
13.36
|
-1.85 |
-4.37 |
|
NPLPPLPPL |
13.68
|
-2.21 |
-4.73 |
|
KSPKAYPKL |
13.82
|
-1.29 |
-3.81 |
| P38266 |
FLPPPKPFR |
9.72
|
-4.39 |
-6.91 |
|
FQPPPKPFR |
9.81
|
-2.64 |
-5.16 |
|
IMPPPKPFR |
10.21
|
-4.76 |
-7.28 |
| P40483 |
PSVPPRNYF |
12.32
|
-1.22 |
-3.74 |
|
DAPASKPSV |
16.57
|
-0.19 |
-2.71 |
|
