|
Matrix information:
(Help)
ADAN-name: PEX13_1N5Z-20.PDB
Scoring matrix: PEX13_1N5Z-20_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.41
Foldx random average score for Saccharomyces cerevisiae: 17.097 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 4413
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 2766
Total fragments: 1060823
Proteins after random average filtering: 2766
Total fragments: 400278
Proteins after disorder filtering: 1658
Total fragments: 23790
Proteins after pattern filtering: 686
Total fragments: 2572
Proteins after MINT filtering: 6
Total fragments: 32
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
17.41
|
-2.86 |
0.00 |
| Best peptides |
FPRRRGMWW |
0.00
|
-9.68 |
-6.82 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
IPRPPFSSH |
12.17
|
-8.12 |
-5.26 |
|
PRPPFSSHS |
15.23
|
-7.60 |
-4.74 |
|
DEDIPRPPF |
17.04
|
-6.49 |
-3.64 |
| P40450 |
PPLPNGLLS |
12.01
|
-7.32 |
-4.46 |
|
PKLFPRLSS |
14.20
|
-7.29 |
-4.44 |
|
PPPPPLPQS |
14.44
|
-9.13 |
-6.28 |
| P47135 |
KTPRASPSR |
12.53
|
-9.16 |
-6.30 |
|
TLSPGQPLN |
14.16
|
-5.68 |
-2.82 |
|
SPGQPLNAN |
15.07
|
-6.66 |
-3.81 |
| P15274 |
YPPPPKPSY |
10.03
|
-8.93 |
-6.07 |
|
QNPKNKPGW |
10.29
|
-8.82 |
-5.96 |
|
PKNKPGWVV |
11.99
|
-9.48 |
-6.63 |
| P53112 |
SISPNGIPG |
16.29
|
-4.94 |
-2.09 |
| Q12110 |
SPVAPSPNH |
13.56
|
-6.18 |
-3.32 |
|
