|
Matrix information:
(Help)
ADAN-name: PEX13_1N5Z-12.PDB
Scoring matrix: PEX13_1N5Z-12_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.68
Foldx random average score for Saccharomyces cerevisiae: 11.651 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 4413
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 2766
Total fragments: 1063589
Proteins after random average filtering: 2766
Total fragments: 430776
Proteins after disorder filtering: 1666
Total fragments: 25672
Proteins after pattern filtering: 770
Total fragments: 4409
Proteins after MINT filtering: 7
Total fragments: 62
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
14.68
|
-1.61 |
0.00 |
| Best peptides |
YKMRRRRK |
0.00
|
-8.51 |
-6.90 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
EDIPRPPF |
7.03
|
-6.53 |
-4.92 |
|
DIPRPPFS |
7.21
|
-6.88 |
-5.27 |
|
DEDIPRPP |
10.27
|
-5.68 |
-4.07 |
| P40450 |
SPKLFPRL |
7.21
|
-6.64 |
-5.03 |
|
GAVPPPPP |
8.88
|
-5.14 |
-3.53 |
|
AVPPPPPP |
9.00
|
-4.87 |
-3.26 |
| P47135 |
FSYPGVFP |
7.43
|
-6.36 |
-4.75 |
|
PRASPSRS |
9.40
|
-4.09 |
-2.48 |
|
CPFPLPPP |
9.51
|
-5.08 |
-3.47 |
| P15274 |
VYPPPPKP |
7.31
|
-5.81 |
-4.20 |
|
VVYPPPPK |
7.90
|
-5.42 |
-3.81 |
|
DQNPKNKP |
8.70
|
-4.81 |
-3.20 |
| P53112 |
ISPNGIPG |
10.10
|
-3.57 |
-1.96 |
| Q08446 |
HSPISPLK |
9.64
|
-3.73 |
-2.12 |
|
SSHSPISP |
10.61
|
-2.20 |
-0.59 |
| Q12110 |
PVAPSPNH |
10.47
|
-4.12 |
-2.51 |
|
GSPVAPSP |
11.28
|
-2.73 |
-1.12 |
|
