|
Matrix information:
(Help)
ADAN-name: PEX13_1JQQ-8.PDB
Scoring matrix: PEX13_1JQQ-8_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.17
Foldx random average score for Saccharomyces cerevisiae: 12.385 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 4413
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 2766
Total fragments: 1063589
Proteins after random average filtering: 2766
Total fragments: 444169
Proteins after disorder filtering: 1675
Total fragments: 27885
Proteins after pattern filtering: 791
Total fragments: 5023
Proteins after MINT filtering: 7
Total fragments: 70
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
15.17
|
-1.45 |
0.00 |
| Best peptides |
RHPYRFPF |
0.00
|
-5.97 |
-4.52 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
EDIPRPPF |
5.25
|
-8.64 |
-7.19 |
|
PRPPFSSH |
9.45
|
-5.02 |
-3.57 |
|
IPRPPFSS |
9.95
|
-3.60 |
-2.15 |
| P40450 |
SSPKLFPR |
5.29
|
-6.45 |
-5.00 |
|
APPPLPDL |
5.98
|
-8.16 |
-6.71 |
|
PPPPPLPQ |
7.11
|
-5.89 |
-4.44 |
| P47135 |
CPFPLPPP |
8.41
|
-7.80 |
-6.35 |
|
QCPFPLPP |
8.55
|
-4.60 |
-3.15 |
|
SYPGVFPV |
8.69
|
-5.52 |
-4.07 |
| P15274 |
PPPPKPSY |
5.23
|
-8.27 |
-6.82 |
|
QNPKNKPG |
7.89
|
-5.39 |
-3.94 |
|
NPKNKPGW |
7.96
|
-7.18 |
-5.73 |
| P53112 |
SPNGIPGI |
10.17
|
-5.08 |
-3.63 |
| Q08446 |
HSPISPLK |
8.75
|
-4.13 |
-2.68 |
|
SHSPISPL |
9.90
|
-4.49 |
-3.04 |
| Q12110 |
GSPVAPSP |
9.87
|
-4.28 |
-2.83 |
|
