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Matrix information:
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ADAN-name: PEX13_1JQQ-7.PDB
Scoring matrix: PEX13_1JQQ-7_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAA
Foldx wt ligand score: 15.8
Foldx random average score for Saccharomyces cerevisiae: 11.978 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 4413
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 2766
Total fragments: 1063589
Proteins after random average filtering: 2766
Total fragments: 443808
Proteins after disorder filtering: 1610
Total fragments: 19109
Proteins after pattern filtering: 674
Total fragments: 3048
Proteins after MINT filtering: 6
Total fragments: 45
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAA |
15.80
|
-2.47 |
0.00 |
| Best peptides |
MKRIFPFS |
0.00
|
-7.79 |
-5.32 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
DIPRPPFS |
6.55
|
-9.78 |
-7.31 |
|
IPRPPFSS |
8.77
|
-4.28 |
-1.81 |
|
EDIPRPPF |
9.95
|
-5.82 |
-3.35 |
| P40450 |
PKLFPRLS |
6.08
|
-7.66 |
-5.19 |
|
PPPPLPQS |
7.32
|
-6.42 |
-3.95 |
|
PPPLPDLF |
7.40
|
-6.80 |
-4.33 |
| P47135 |
YPGVFPVS |
7.46
|
-7.19 |
-4.72 |
|
KTPRASPS |
8.31
|
-4.77 |
-2.30 |
|
GPLPEPLS |
9.27
|
-4.30 |
-1.83 |
| P15274 |
PKNKPGWV |
8.92
|
-6.59 |
-4.12 |
|
YPPPPKPS |
9.10
|
-5.08 |
-2.61 |
|
PPPKPSYN |
9.40
|
-8.52 |
-6.05 |
| P53112 |
PNGIPGID |
9.54
|
-7.09 |
-4.62 |
| Q08446 |
HSPISPLK |
9.28
|
-5.96 |
-3.49 |
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