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Matrix information:
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ADAN-name: PEX13_1JQQ-29.PDB
Scoring matrix: PEX13_1JQQ-29_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 20.21
Foldx random average score for Saccharomyces cerevisiae: 14.761 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 4413
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 2766
Total fragments: 1058057
Proteins after random average filtering: 2766
Total fragments: 457723
Proteins after disorder filtering: 1518
Total fragments: 20070
Proteins after pattern filtering: 729
Total fragments: 4513
Proteins after MINT filtering: 7
Total fragments: 67
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
20.21
|
-4.02 |
0.00 |
| Best peptides |
HYPPIRRHLR |
0.00
|
-13.44 |
-9.42 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
PRPPFSSHSD |
8.89
|
-8.31 |
-4.29 |
|
DIPRPPFSSH |
12.12
|
-8.51 |
-4.49 |
|
EDIPRPPFSS |
13.68
|
-7.99 |
-3.97 |
| P40450 |
APPLPNGLLS |
9.60
|
-10.05 |
-6.03 |
|
PPPPPPPLPQ |
10.48
|
-11.03 |
-7.01 |
|
SPKLFPRLSS |
10.77
|
-8.59 |
-4.57 |
| P47135 |
SYPGVFPVSG |
10.39
|
-12.43 |
-8.41 |
|
ASKTPRASPS |
12.41
|
-7.05 |
-3.03 |
|
EKEQCPFPLP |
12.50
|
-10.85 |
-6.83 |
| P15274 |
GWVVYPPPPK |
10.70
|
-9.82 |
-5.80 |
|
VYPPPPKPSY |
10.81
|
-11.18 |
-7.16 |
|
VVYPPPPKPS |
12.39
|
-10.80 |
-6.78 |
| P53112 |
SPNGIPGIDT |
12.06
|
-8.90 |
-4.88 |
|
FSISPNGIPG |
13.63
|
-8.85 |
-4.83 |
| Q08446 |
SSHSPISPLK |
12.89
|
-8.23 |
-4.21 |
| Q12110 |
PVAPSPNHRS |
12.54
|
-7.38 |
-3.36 |
|
GSPVAPSPNH |
13.96
|
-9.50 |
-5.48 |
|
QGSPVAPSPN |
14.58
|
-7.85 |
-3.83 |
|
