|
Matrix information:
(Help)
ADAN-name: PEX13_1JQQ-18.PDB
Scoring matrix: PEX13_1JQQ-18_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAAA
Foldx wt ligand score: 21.13
Foldx random average score for Saccharomyces cerevisiae: 25.464 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 4413
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 2766
Total fragments: 1058057
Proteins after random average filtering: 2766
Total fragments: 651033
Proteins after disorder filtering: 1682
Total fragments: 51824
Proteins after pattern filtering: 792
Total fragments: 6256
Proteins after MINT filtering: 7
Total fragments: 63
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAAA |
21.13
|
4.11 |
0.00 |
| Best peptides |
RIPIRRRRCF |
0.00
|
-3.90 |
-8.01 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
DIPRPPFSSH |
15.76
|
-5.33 |
-9.44 |
|
EDIPRPPFSS |
19.58
|
-0.11 |
-4.22 |
|
IPRPPFSSHS |
19.76
|
3.43 |
-0.68 |
| P40450 |
SPKLFPRLSS |
11.73
|
-6.67 |
-10.78 |
|
PPPLPESLSM |
14.21
|
-3.67 |
-7.78 |
|
PPPPPLPQSL |
15.27
|
-3.28 |
-7.38 |
| P47135 |
YPGVFPVSGF |
13.62
|
-6.83 |
-10.94 |
|
ASTLSPGQPL |
14.04
|
-4.31 |
-8.41 |
|
TPRASPSRSK |
14.73
|
-1.54 |
-5.65 |
| P15274 |
DDQNPKNKPG |
13.90
|
-1.67 |
-5.78 |
|
PKNKPGWVVY |
13.96
|
-3.64 |
-7.75 |
|
NPKNKPGWVV |
15.82
|
-2.67 |
-6.78 |
| P53112 |
SISPNGIPGI |
15.95
|
-0.30 |
-4.41 |
|
FSISPNGIPG |
17.88
|
-1.18 |
-5.29 |
|
SPNGIPGIDT |
24.17
|
-3.20 |
-7.31 |
| Q08446 |
NSSHSPISPL |
14.43
|
-3.26 |
-7.37 |
| Q12110 |
SPVAPSPNHR |
16.33
|
1.88 |
-2.23 |
|
NSQGSPVAPS |
20.63
|
-0.64 |
-4.75 |
|
QGSPVAPSPN |
21.62
|
1.67 |
-2.44 |
|
