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Matrix information:
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ADAN-name: PEX13_1JQQ-17.PDB
Scoring matrix: PEX13_1JQQ-17_mat
Uniprot code: P80667
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.38
Foldx random average score for Saccharomyces cerevisiae: 16.336 Available information for P80667 in MINT (Nov 2008):
Nš of interacting proteins: 17
Proteins belonging to other specie: 0
Nš of interactions described: 24
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 4413
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 2766
Total fragments: 1060823
Proteins after random average filtering: 2766
Total fragments: 468224
Proteins after disorder filtering: 1680
Total fragments: 32628
Proteins after pattern filtering: 740
Total fragments: 3403
Proteins after MINT filtering: 6
Total fragments: 31
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
15.38
|
-2.01 |
0.00 |
| Best peptides |
YRKRPGRSV |
0.00
|
-7.25 |
-5.24 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q04370 |
IPRPPFSSH |
10.50
|
-5.84 |
-3.83 |
|
PRPPFSSHS |
14.36
|
-4.03 |
-2.02 |
|
DEDIPRPPF |
15.85
|
-4.92 |
-2.91 |
| P40450 |
PPLPESLSM |
11.56
|
-1.84 |
0.17 |
|
PPLPNGLLS |
11.63
|
-3.73 |
-1.72 |
|
PKLFPRLSS |
11.71
|
-4.46 |
-2.45 |
| P47135 |
KTPRASPSR |
9.33
|
-0.77 |
1.24 |
|
YFSYPGVFP |
10.65
|
-6.74 |
-4.73 |
|
ASKTPRASP |
12.70
|
-5.06 |
-3.05 |
| P15274 |
PKNKPGWVV |
11.06
|
-5.91 |
-3.90 |
|
YPPPPKPSY |
13.46
|
-5.08 |
-3.07 |
|
PPPKPSYNS |
13.87
|
-4.49 |
-2.48 |
| P53112 |
SISPNGIPG |
13.44
|
-2.55 |
-0.54 |
| Q12110 |
SPVAPSPNH |
12.51
|
-4.38 |
-2.37 |
|
QGSPVAPSP |
15.04
|
-4.82 |
-2.81 |
|
