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Matrix information:
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ADAN-name: NBP2_1YN8-29.PDB
Scoring matrix: NBP2_1YN8-29_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 16.67
Foldx random average score for Saccharomyces cerevisiae: 12.365 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2171454
Proteins after random average filtering: 5078
Total fragments: 986487
Proteins after disorder filtering: 2796
Total fragments: 38086
Proteins after pattern filtering: 1430
Total fragments: 8530
Proteins after MINT filtering: 6
Total fragments: 105
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
16.67
|
-2.46 |
0.00 |
| Best peptides |
HMPRRYPHRK |
0.00
|
-8.53 |
-6.07 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RSKPLPPQLL |
7.64
|
-9.65 |
-7.19 |
|
ASPSYPSIFR |
8.44
|
-8.20 |
-5.74 |
|
SKPLPPQLLS |
8.60
|
-9.19 |
-6.73 |
| P53933 |
RRPPPPPIPS |
7.99
|
-9.86 |
-7.40 |
|
VAPPPLPNRQ |
9.04
|
-8.24 |
-5.78 |
|
VRTRRRPPPP |
9.09
|
-8.95 |
-6.49 |
| P48562 |
LNPYRPHHNM |
5.79
|
-7.83 |
-5.37 |
|
PLNPYRPHHN |
6.89
|
-7.22 |
-4.76 |
|
PKPPISAPRA |
7.06
|
-8.38 |
-5.92 |
| Q03497 |
VKKSFPSKNP |
7.52
|
-7.75 |
-5.29 |
|
KPKVKPSKPE |
8.20
|
-8.05 |
-5.59 |
|
FIPSRPAPKP |
8.35
|
-9.45 |
-6.99 |
| P08018 |
GPPPRLPSDK |
7.56
|
-9.62 |
-7.16 |
|
RAPRRPLSTQ |
7.60
|
-9.36 |
-6.90 |
|
TQHPTRPNVA |
9.23
|
-7.66 |
-5.20 |
| Q12469 |
ELKPFPRPSD |
8.32
|
-7.18 |
-4.72 |
|
KPFPRPSDDD |
8.69
|
-8.64 |
-6.18 |
|
LKPFPRPSDD |
11.04
|
-5.81 |
-3.35 |
|
