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Matrix information:
(Help) ADAN-name: NBP2_1YN8-28.PDB Scoring matrix: NBP2_1YN8-28_mat Uniprot code: Q12163 Genome source: Saccharomyces cerevisiae Wild-type ligand: AAAAAAAAAA Foldx wt ligand score: 20.92 Foldx random average score for Saccharomyces cerevisiae: 18.618 Available information for Q12163 in MINT (Nov 2008): Nš of interacting proteins: 10 Proteins belonging to other specie: 0 Nš of interactions described: 20 Interactions with other species: 0
Genome scanning information:
Subcellular location: True Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 5078 Total fragments: 2171454 Proteins after random average filtering: 5078 Total fragments: 1092747 Proteins after disorder filtering: 3017 Total fragments: 47770 Proteins after pattern filtering: 1483 Total fragments: 8005 Proteins after MINT filtering: 7 Total fragments: 94
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
20.92
|
2.19 |
0.00 |
| Best peptides |
RKPRFPRPGR |
0.00
|
-6.20 |
-8.39 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
KRSKPLPPQL |
13.68
|
-5.00 |
-7.19 |
|
APTKPNPQGH |
14.36
|
-5.51 |
-7.70 |
|
TPSRPVPPDS |
14.46
|
-5.34 |
-7.53 |
| P53933 |
RVAPPPLPNR |
11.31
|
-5.38 |
-7.57 |
|
TRRRPPPPPI |
12.62
|
-6.80 |
-8.99 |
|
RPPPPPIPST |
12.93
|
-4.80 |
-6.99 |
| P48562 |
NPYRPHHNMI |
9.20
|
-8.10 |
-10.29 |
|
MRQAPKRPDA |
12.19
|
-5.65 |
-7.84 |
|
LNPYRPHHNM |
13.97
|
-4.91 |
-7.10 |
| Q03497 |
KPSKPEAKSK |
12.53
|
-5.36 |
-7.55 |
|
LPPIPPTKSK |
13.56
|
-4.68 |
-6.87 |
|
FPSKNPLKNS |
14.13
|
-5.84 |
-8.03 |
| Q12469 |
LKPFPRPSDD |
14.59
|
-4.18 |
-6.37 |
|
RLAPSAPATK |
14.82
|
-4.98 |
-7.17 |
|
PFPRPSDDDY |
14.94
|
-6.08 |
-8.27 |
| P25293 |
PTPHNTPASV |
17.75
|
-2.92 |
-5.11 |
| P08018 |
RAPRRPLSTQ |
9.48
|
-6.59 |
-8.78 |
|
PPPRLPSDKF |
12.74
|
-6.70 |
-8.89 |
|
APRRPLSTQH |
14.54
|
-6.45 |
-8.64 |
|