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Matrix information:
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ADAN-name: NBP2_1YN8-23.PDB
Scoring matrix: NBP2_1YN8-23_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 12.89
Foldx random average score for Saccharomyces cerevisiae: 10.476 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2186688
Proteins after random average filtering: 5078
Total fragments: 994558
Proteins after disorder filtering: 3181
Total fragments: 45436
Proteins after pattern filtering: 1342
Total fragments: 5468
Proteins after MINT filtering: 7
Total fragments: 68
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
12.89
|
-1.56 |
0.00 |
| Best peptides |
RELKRWM |
0.00
|
-5.54 |
-3.98 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RYPQTPS |
7.58
|
-2.95 |
-1.39 |
|
EAPKPPA |
7.72
|
-3.50 |
-1.94 |
|
SKPLPPQ |
8.15
|
-2.84 |
-1.28 |
| P53933 |
PPPLPNR |
7.59
|
-4.73 |
-3.17 |
|
RRRPPPP |
7.82
|
-4.35 |
-2.79 |
|
RPPPPPI |
8.58
|
-1.72 |
-0.16 |
| P48562 |
SPLNPYR |
6.52
|
-3.76 |
-2.20 |
|
RGPMHPN |
6.62
|
-4.94 |
-3.38 |
|
QFPRGPM |
7.12
|
-3.97 |
-2.41 |
| Q03497 |
PKVKPSK |
6.25
|
-5.98 |
-4.42 |
|
FPSKNPL |
7.00
|
-3.87 |
-2.31 |
|
EQPLPPI |
7.39
|
-3.13 |
-1.57 |
| Q12469 |
LKPFPRP |
8.38
|
-3.96 |
-2.40 |
|
PFPRPSD |
9.46
|
-3.03 |
-1.47 |
| P25293 |
PTPHNTP |
9.38
|
-4.37 |
-2.81 |
| P08018 |
RAPRRPL |
5.43
|
-5.22 |
-3.66 |
|
PPRLPSD |
7.39
|
-5.95 |
-4.39 |
|
APRRPLS |
8.16
|
-4.76 |
-3.20 |
|
