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Matrix information:
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ADAN-name: NBP2_1YN8-21.PDB
Scoring matrix: NBP2_1YN8-21_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 20.93
Foldx random average score for Saccharomyces cerevisiae: 18.691 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2171454
Proteins after random average filtering: 5078
Total fragments: 1276917
Proteins after disorder filtering: 3048
Total fragments: 51225
Proteins after pattern filtering: 1215
Total fragments: 3301
Proteins after MINT filtering: 7
Total fragments: 38
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAGGAAAA |
20.93
|
-0.10 |
0.00 |
| Best peptides |
EWRMGRPKMR |
0.00
|
-5.17 |
-5.07 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
IASPTSPKSL |
14.59
|
-3.42 |
-3.32 |
|
RSKPLPPQLL |
14.70
|
-2.37 |
-2.27 |
|
RRYPQTPSYY |
16.53
|
-1.20 |
-1.10 |
| P53933 |
VSYPGNPTSR |
13.32
|
-2.75 |
-2.65 |
|
PPPPIPSTQK |
17.32
|
-3.58 |
-3.48 |
| P48562 |
PYRPHHNMIN |
11.30
|
-4.89 |
-4.79 |
|
HVQPVAPKND |
11.84
|
-4.01 |
-3.91 |
|
PLNPYRPHHN |
13.55
|
-3.40 |
-3.30 |
| Q03497 |
PIPPTKSKTS |
13.54
|
-2.89 |
-2.79 |
|
FPSKNPLKNS |
14.24
|
-3.73 |
-3.63 |
|
THAPTTPNRT |
15.50
|
-1.80 |
-1.70 |
| Q12469 |
RLAPSAPATK |
15.77
|
-2.44 |
-2.34 |
|
PSAPATKNHD |
17.56
|
-1.44 |
-1.34 |
| P25293 |
PTPHNTPASV |
18.62
|
-0.58 |
-0.48 |
| P08018 |
TQHPTRPNVA |
16.00
|
-2.07 |
-1.97 |
|
PPRLPSDKFS |
16.81
|
-4.87 |
-4.77 |
|
RAPRRPLSTQ |
17.45
|
-2.56 |
-2.46 |
|
