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Matrix information:
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ADAN-name: NBP2_1YN8-20.PDB
Scoring matrix: NBP2_1YN8-20_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 18.26
Foldx random average score for Saccharomyces cerevisiae: 17.814 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5078
Total fragments: 957226
Proteins after disorder filtering: 3144
Total fragments: 57706
Proteins after pattern filtering: 1496
Total fragments: 7550
Proteins after MINT filtering: 6
Total fragments: 86
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
18.26
|
-3.70 |
0.00 |
| Best peptides |
RRFRRGHHI |
0.00
|
-6.66 |
-2.96 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RRYPQTPSY |
9.99
|
-5.52 |
-1.82 |
|
RPVPPDSSY |
11.72
|
-6.10 |
-2.40 |
|
KRSKPLPPQ |
12.43
|
-5.94 |
-2.24 |
| P53933 |
PPLPNRQLP |
13.73
|
-5.92 |
-2.22 |
|
PPIPSTQKP |
15.05
|
-5.91 |
-2.21 |
|
NDLPMELPH |
15.87
|
-2.32 |
1.38 |
| P48562 |
NPYRPHHNM |
11.30
|
-10.63 |
-6.93 |
|
GQFPRGPMH |
12.52
|
-2.45 |
1.25 |
|
QRTAPKPPI |
13.94
|
-6.01 |
-2.31 |
| Q03497 |
IPSRPAPKP |
9.81
|
-9.33 |
-5.63 |
|
KQHKPKVKP |
10.83
|
-7.64 |
-3.94 |
|
KKSFPSKNP |
10.94
|
-6.47 |
-2.77 |
| P08018 |
HPTRPNVAP |
12.39
|
-7.57 |
-3.87 |
|
PRRPLSTQH |
13.50
|
-4.11 |
-0.41 |
|
APRRPLSTQ |
14.39
|
-6.48 |
-2.78 |
| Q12469 |
LKPFPRPSD |
12.88
|
-3.54 |
0.16 |
|
RLAPSAPAT |
13.92
|
-4.42 |
-0.72 |
|
APSAPATKN |
16.08
|
-4.65 |
-0.95 |
|
