|
Matrix information:
(Help)
ADAN-name: NBP2_1YN8-15.PDB
Scoring matrix: NBP2_1YN8-15_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.08
Foldx random average score for Saccharomyces cerevisiae: 12.886 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5078
Total fragments: 905384
Proteins after disorder filtering: 2728
Total fragments: 25027
Proteins after pattern filtering: 1118
Total fragments: 3510
Proteins after MINT filtering: 6
Total fragments: 50
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.08
|
-0.12 |
0.00 |
| Best peptides |
RRFIIRKIR |
0.00
|
-6.56 |
-6.44 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
KRSKPLPPQ |
9.63
|
-4.37 |
-4.25 |
|
RYPQTPSYY |
9.97
|
-2.78 |
-2.66 |
|
RTEPSTPSR |
11.41
|
-5.20 |
-5.08 |
| P53933 |
PPPIPSTQK |
10.94
|
-4.56 |
-4.44 |
|
RRPPPPPIP |
12.05
|
-5.55 |
-5.43 |
|
RRRPPPPPI |
12.10
|
-7.11 |
-6.99 |
| P48562 |
NPYRPHHNM |
8.56
|
-8.84 |
-8.72 |
|
RQAPKRPDA |
8.76
|
-3.43 |
-3.31 |
|
KPPISAPRA |
9.61
|
-5.87 |
-5.75 |
| Q03497 |
HKPKVKPSK |
6.71
|
-3.16 |
-3.04 |
|
FPSKNPLKN |
10.76
|
-5.01 |
-4.89 |
|
LPPIPPTKS |
10.84
|
-5.43 |
-5.31 |
| P08018 |
APRRPLSTQ |
8.62
|
-4.67 |
-4.55 |
|
RAPRRPLST |
9.76
|
-7.35 |
-7.23 |
|
PPPRLPSDK |
10.52
|
-4.92 |
-4.80 |
| Q12469 |
LKPFPRPSD |
9.91
|
-2.32 |
-2.20 |
|
RLAPSAPAT |
12.47
|
-2.05 |
-1.93 |
|
