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Matrix information:
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ADAN-name: NBP2_1YN8-13.PDB
Scoring matrix: NBP2_1YN8-13_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 20.87
Foldx random average score for Saccharomyces cerevisiae: 16.314 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2181610
Proteins after random average filtering: 5078
Total fragments: 863043
Proteins after disorder filtering: 2927
Total fragments: 36202
Proteins after pattern filtering: 1415
Total fragments: 7121
Proteins after MINT filtering: 6
Total fragments: 83
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
20.87
|
1.13 |
0.00 |
| Best peptides |
RRRRHPFY |
0.00
|
-6.47 |
-7.60 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RYPQTPSY |
9.98
|
-2.22 |
-3.35 |
|
YPQTPSYY |
10.09
|
-3.82 |
-4.95 |
|
RPVPPDSS |
11.27
|
-4.92 |
-6.05 |
| P53933 |
RPPPPPIP |
8.56
|
-7.72 |
-8.85 |
|
RVAPPPLP |
9.37
|
-5.35 |
-6.48 |
|
RRRPPPPP |
9.59
|
-5.10 |
-6.23 |
| P48562 |
NPYRPHHN |
10.66
|
-6.86 |
-7.99 |
|
RGPMHPNN |
11.68
|
-4.03 |
-5.16 |
|
APKRPDAD |
11.78
|
-5.17 |
-6.30 |
| Q03497 |
IPSRPAPK |
10.53
|
-7.15 |
-8.28 |
|
RPAPKPPS |
11.03
|
-5.09 |
-6.22 |
|
GKFIPSRP |
11.90
|
-4.50 |
-5.63 |
| P08018 |
RAPRRPLS |
6.08
|
-8.56 |
-9.69 |
|
HPTRPNVA |
10.65
|
-6.30 |
-7.43 |
|
RPNVAPHK |
10.97
|
-5.51 |
-6.64 |
| Q12469 |
LKPFPRPS |
12.98
|
-4.04 |
-5.17 |
|
PFPRPSDD |
13.68
|
-3.67 |
-4.80 |
|
RLAPSAPA |
13.82
|
-3.82 |
-4.95 |
|
