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Matrix information:
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ADAN-name: NBP2_1YN8-11.PDB
Scoring matrix: NBP2_1YN8-11_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 12.97
Foldx random average score for Saccharomyces cerevisiae: 9.882 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2186688
Proteins after random average filtering: 5078
Total fragments: 938369
Proteins after disorder filtering: 3192
Total fragments: 55144
Proteins after pattern filtering: 1543
Total fragments: 9269
Proteins after MINT filtering: 6
Total fragments: 100
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
12.97
|
-0.72 |
0.00 |
| Best peptides |
YPPLHPY |
0.00
|
-7.43 |
-6.71 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
YPQTPSY |
4.28
|
-7.23 |
-6.51 |
|
FPNLTPN |
6.23
|
-5.36 |
-4.64 |
|
SKPLPPQ |
6.40
|
-5.21 |
-4.49 |
| P53933 |
RRPPPPP |
5.13
|
-5.78 |
-5.06 |
|
RPPPPPI |
5.26
|
-6.32 |
-5.60 |
|
RRRPPPP |
5.30
|
-6.78 |
-6.06 |
| P48562 |
NPYRPHH |
5.36
|
-5.21 |
-4.49 |
|
RGPMHPN |
6.09
|
-6.92 |
-6.20 |
|
FPRGPMH |
6.65
|
-4.45 |
-3.73 |
| Q03497 |
FPSKNPL |
5.16
|
-5.54 |
-4.82 |
|
RPAPKPP |
5.62
|
-5.37 |
-4.65 |
|
LPPIPPT |
6.07
|
-6.38 |
-5.66 |
| P08018 |
RAPRRPL |
5.99
|
-7.46 |
-6.74 |
|
RPNVAPH |
6.34
|
-6.34 |
-5.62 |
|
PPPRLPS |
6.96
|
-7.31 |
-6.59 |
| Q12469 |
LKPFPRP |
6.26
|
-5.62 |
-4.90 |
|
KPFPRPS |
8.00
|
-4.59 |
-3.87 |
|
RLAPSAP |
8.64
|
-3.88 |
-3.16 |
|
