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Matrix information:
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ADAN-name: NBP2_1YN8-10.PDB
Scoring matrix: NBP2_1YN8-10_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 15.33
Foldx random average score for Saccharomyces cerevisiae: 18.045 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2181610
Proteins after random average filtering: 5078
Total fragments: 1338769
Proteins after disorder filtering: 3342
Total fragments: 106333
Proteins after pattern filtering: 1641
Total fragments: 13710
Proteins after MINT filtering: 7
Total fragments: 164
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
15.33
|
5.53 |
0.00 |
| Best peptides |
RPIRGWWW |
0.00
|
-4.75 |
-10.28 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RPVPPDSS |
9.18
|
0.21 |
-5.32 |
|
KPLPPQLL |
9.94
|
1.49 |
-4.04 |
|
YPQTPSYY |
10.73
|
0.04 |
-5.49 |
| P53933 |
RPPPPPIP |
7.48
|
-0.60 |
-6.13 |
|
RVAPPPLP |
8.71
|
-0.20 |
-5.73 |
|
RRRPPPPP |
10.53
|
-1.49 |
-7.02 |
| P48562 |
QFPRGPMH |
6.05
|
-5.44 |
-10.97 |
|
NPYRPHHN |
9.03
|
1.47 |
-4.06 |
|
FPRGPMHP |
9.22
|
1.37 |
-4.16 |
| Q03497 |
PKVKPSKP |
9.98
|
1.79 |
-3.74 |
|
GKFIPSRP |
9.99
|
0.50 |
-5.03 |
|
KPSKPEAK |
10.22
|
0.71 |
-4.82 |
| Q12469 |
PFPRPSDD |
11.04
|
1.43 |
-4.10 |
|
KPFPRPSD |
11.88
|
1.13 |
-4.40 |
|
HRLAPSAP |
13.05
|
3.20 |
-2.33 |
| P25293 |
PHNTPASV |
13.31
|
3.17 |
-2.36 |
| P08018 |
RPNVAPHK |
7.11
|
-3.96 |
-9.49 |
|
RAPRRPLS |
9.67
|
-1.96 |
-7.49 |
|
APRRPLST |
10.48
|
-0.02 |
-5.55 |
|
