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Matrix information:
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ADAN-name: NBP2_1SEM-27.PDB
Scoring matrix: NBP2_1SEM-27_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AGAAAAAAA
Foldx wt ligand score: 15.78
Foldx random average score for Saccharomyces cerevisiae: 13.779 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5078
Total fragments: 941379
Proteins after disorder filtering: 3078
Total fragments: 59100
Proteins after pattern filtering: 1594
Total fragments: 13535
Proteins after MINT filtering: 7
Total fragments: 174
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AGAAAAAAA |
15.78
|
-2.07 |
0.00 |
| Best peptides |
MRRPRRIRR |
0.00
|
-7.59 |
-5.52 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
SSSPPPIPK |
7.29
|
-5.16 |
-3.09 |
|
KRSKPLPPQ |
8.14
|
-5.31 |
-3.24 |
|
KREAPKPPA |
8.55
|
-5.62 |
-3.55 |
| P53933 |
RRRPPPPPI |
5.59
|
-6.25 |
-4.18 |
|
RPPPPPIPS |
5.76
|
-6.92 |
-4.85 |
|
RRPPPPPIP |
6.15
|
-6.19 |
-4.12 |
| P48562 |
MRQAPKRPD |
6.93
|
-6.62 |
-4.55 |
|
RTAPKPPIS |
8.18
|
-4.82 |
-2.75 |
|
ISAPRAPYP |
8.61
|
-6.40 |
-4.33 |
| Q03497 |
QHKPKVKPS |
7.18
|
-5.87 |
-3.80 |
|
SRPAPKPPS |
9.01
|
-5.51 |
-3.44 |
|
PSRPAPKPP |
9.15
|
-5.88 |
-3.81 |
| Q12469 |
ELKPFPRPS |
7.60
|
-5.81 |
-3.74 |
|
KPFPRPSDD |
9.45
|
-3.74 |
-1.67 |
|
LKPFPRPSD |
10.17
|
-3.37 |
-1.30 |
| P25293 |
APTPHNTPA |
9.95
|
-5.72 |
-3.65 |
| P08018 |
LSTQHPTRP |
8.51
|
-7.12 |
-5.05 |
|
VDGPPPRLP |
8.65
|
-5.10 |
-3.03 |
|
DGPPPRLPS |
8.96
|
-5.49 |
-3.42 |
|
