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Matrix information:
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ADAN-name: NBP2_1SEM-25.PDB
Scoring matrix: NBP2_1SEM-25_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 19.42
Foldx random average score for Saccharomyces cerevisiae: 14.994 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5078
Total fragments: 874292
Proteins after disorder filtering: 2804
Total fragments: 39880
Proteins after pattern filtering: 1473
Total fragments: 9833
Proteins after MINT filtering: 6
Total fragments: 125
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
19.42
|
-1.16 |
0.00 |
| Best peptides |
HRRRRPPFM |
0.00
|
-8.98 |
-7.82 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RYPQTPSYY |
8.83
|
-6.91 |
-5.75 |
|
PKREAPKPP |
9.72
|
-6.77 |
-5.61 |
|
STPSRPVPP |
9.84
|
-4.92 |
-3.76 |
| P53933 |
RRRPPPPPI |
6.10
|
-8.13 |
-6.97 |
|
RTRRRPPPP |
6.29
|
-8.31 |
-7.15 |
|
TRRRPPPPP |
7.05
|
-8.52 |
-7.36 |
| P48562 |
PYRPHHNMI |
7.56
|
-3.14 |
-1.98 |
|
LNPYRPHHN |
7.79
|
-6.84 |
-5.68 |
|
TMRQAPKRP |
8.15
|
-5.51 |
-4.35 |
| Q03497 |
FIPSRPAPK |
8.11
|
-6.17 |
-5.01 |
|
VKPSKPEAK |
8.99
|
-7.57 |
-6.41 |
|
SFPSKNPLK |
9.61
|
-5.86 |
-4.70 |
| P08018 |
PRRPLSTQH |
7.66
|
-7.23 |
-6.07 |
|
TRPNVAPHK |
9.38
|
-8.08 |
-6.92 |
|
RAPRRPLST |
10.93
|
-5.33 |
-4.17 |
| Q12469 |
PHRLAPSAP |
11.80
|
-4.45 |
-3.29 |
|
LKPFPRPSD |
12.50
|
-2.99 |
-1.83 |
|
ELKPFPRPS |
12.84
|
-3.67 |
-2.51 |
|
