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Matrix information:
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ADAN-name: NBP2_1SEM-23.PDB
Scoring matrix: NBP2_1SEM-23_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 18.72
Foldx random average score for Saccharomyces cerevisiae: 14.666 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2186688
Proteins after random average filtering: 5078
Total fragments: 955663
Proteins after disorder filtering: 3096
Total fragments: 39729
Proteins after pattern filtering: 1188
Total fragments: 3947
Proteins after MINT filtering: 7
Total fragments: 48
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
18.72
|
-2.02 |
0.00 |
| Best peptides |
RRRRRRR |
0.00
|
-4.56 |
-2.54 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
APTKPNP |
11.80
|
-5.01 |
-2.99 |
|
TPSRPVP |
12.03
|
-5.53 |
-3.51 |
|
EAPKPPA |
12.58
|
-2.00 |
0.02 |
| P53933 |
PPPLPNR |
10.07
|
-5.79 |
-3.77 |
|
LPMELPH |
13.19
|
-4.72 |
-2.70 |
|
DLPMELP |
13.75
|
-3.94 |
-1.92 |
| P48562 |
SPLNPYR |
10.36
|
-5.03 |
-3.01 |
|
QFPRGPM |
10.74
|
-4.67 |
-2.65 |
|
NPYRPHH |
10.79
|
-4.72 |
-2.70 |
| Q03497 |
PKVKPSK |
9.96
|
-6.29 |
-4.27 |
|
FPSKNPL |
10.93
|
-4.10 |
-2.08 |
|
HKPKVKP |
11.50
|
-4.06 |
-2.04 |
| Q12469 |
LKPFPRP |
10.75
|
-5.62 |
-3.60 |
|
PFPRPSD |
12.81
|
-3.84 |
-1.82 |
| P25293 |
PTPHNTP |
14.48
|
-3.34 |
-1.32 |
| P08018 |
RAPRRPL |
8.27
|
-6.77 |
-4.75 |
|
APRRPLS |
8.48
|
-4.88 |
-2.86 |
|
PPRLPSD |
10.29
|
-5.33 |
-3.31 |
|
