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Matrix information:
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ADAN-name: NBP2_1SEM-20.PDB
Scoring matrix: NBP2_1SEM-20_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 16.54
Foldx random average score for Saccharomyces cerevisiae: 15.694 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5078
Total fragments: 953297
Proteins after disorder filtering: 3035
Total fragments: 44420
Proteins after pattern filtering: 1375
Total fragments: 5252
Proteins after MINT filtering: 7
Total fragments: 70
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
16.54
|
-2.96 |
0.00 |
| Best peptides |
RRRRPGHRM |
0.00
|
-8.00 |
-5.04 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
YPQTPSYYY |
8.90
|
-5.61 |
-2.65 |
|
KRSKPLPPQ |
9.56
|
-8.45 |
-5.49 |
|
RPVPPDSSY |
10.02
|
-9.09 |
-6.13 |
| P53933 |
PPPLPNRQL |
11.22
|
-5.77 |
-2.81 |
|
YNDLPMELP |
12.20
|
-5.97 |
-3.01 |
|
PPPIPSTQK |
14.65
|
-3.84 |
-0.88 |
| P48562 |
NPYRPHHNM |
7.31
|
-8.21 |
-5.25 |
|
MRQAPKRPD |
11.47
|
-4.17 |
-1.21 |
|
FPRGPMHPN |
12.14
|
-5.70 |
-2.74 |
| Q03497 |
KKSFPSKNP |
10.46
|
-4.84 |
-1.88 |
|
KPSKPEAKS |
10.57
|
-4.99 |
-2.03 |
|
HKPKVKPSK |
10.67
|
-5.45 |
-2.49 |
| Q12469 |
LKPFPRPSD |
11.25
|
-6.31 |
-3.35 |
|
RLAPSAPAT |
14.03
|
-7.51 |
-4.55 |
|
HRLAPSAPA |
14.43
|
-2.26 |
0.70 |
| P25293 |
PHNTPASVL |
15.14
|
-1.64 |
1.32 |
|
NAPTPHNTP |
15.16
|
-3.97 |
-1.01 |
| P08018 |
PPRLPSDKF |
11.20
|
-5.92 |
-2.96 |
|
APRRPLSTQ |
12.49
|
-6.11 |
-3.15 |
|
HPTRPNVAP |
13.39
|
-8.23 |
-5.27 |
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