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Matrix information:
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ADAN-name: NBP2_1SEM-16.PDB
Scoring matrix: NBP2_1SEM-16_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 18.78
Foldx random average score for Saccharomyces cerevisiae: 17.956 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5078
Total fragments: 916438
Proteins after disorder filtering: 3184
Total fragments: 60812
Proteins after pattern filtering: 1542
Total fragments: 8668
Proteins after MINT filtering: 7
Total fragments: 106
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
18.78
|
0.78 |
0.00 |
| Best peptides |
RFPRPSRRY |
0.00
|
-2.82 |
-3.60 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
YPQTPSYYY |
8.35
|
-3.42 |
-4.20 |
|
RYPQTPSYY |
10.18
|
-3.60 |
-4.38 |
|
RPVPPDSSY |
12.20
|
-2.80 |
-3.58 |
| P53933 |
PPPIPSTQK |
11.52
|
-1.39 |
-2.17 |
|
YNDLPMELP |
13.45
|
-3.46 |
-4.24 |
|
KRVAPPPLP |
14.10
|
-3.54 |
-4.32 |
| P48562 |
NPYRPHHNM |
9.92
|
-4.72 |
-5.50 |
|
KPPISAPRA |
10.16
|
-2.20 |
-2.98 |
|
QFPRGPMHP |
11.05
|
-3.62 |
-4.40 |
| Q03497 |
KPKVKPSKP |
11.26
|
-5.34 |
-6.12 |
|
KQHKPKVKP |
11.55
|
-4.35 |
-5.13 |
|
IPSRPAPKP |
11.66
|
-5.15 |
-5.93 |
| Q12469 |
PHRLAPSAP |
14.66
|
-3.26 |
-4.04 |
|
LAPSAPATK |
14.75
|
-0.12 |
-0.90 |
|
PSAPATKNH |
16.26
|
-2.33 |
-3.11 |
| P25293 |
NAPTPHNTP |
16.41
|
-1.36 |
-2.14 |
| P08018 |
PPRLPSDKF |
8.91
|
-4.67 |
-5.45 |
|
RAPRRPLST |
12.32
|
-2.84 |
-3.62 |
|
PPPRLPSDK |
13.09
|
-2.31 |
-3.09 |
|
