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Matrix information:
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ADAN-name: NBP2_1SEM-13.PDB
Scoring matrix: NBP2_1SEM-13_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 20.71
Foldx random average score for Saccharomyces cerevisiae: 15.592 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2181610
Proteins after random average filtering: 5077
Total fragments: 844851
Proteins after disorder filtering: 2889
Total fragments: 31140
Proteins after pattern filtering: 1347
Total fragments: 6283
Proteins after MINT filtering: 6
Total fragments: 72
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
20.71
|
-1.69 |
0.00 |
| Best peptides |
RHRFPPRW |
0.00
|
-10.68 |
-8.99 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
EPSTPSRP |
10.96
|
-4.86 |
-3.18 |
|
YPQTPSYY |
11.01
|
-6.49 |
-4.80 |
|
SPSYPSIF |
12.22
|
-5.91 |
-4.22 |
| P53933 |
PPPLPNRQ |
8.27
|
-6.77 |
-5.08 |
|
RPPPPPIP |
9.71
|
-9.57 |
-7.88 |
|
RVAPPPLP |
10.54
|
-8.68 |
-6.99 |
| P48562 |
MRQAPKRP |
8.10
|
-8.66 |
-6.97 |
|
SPLNPYRP |
9.61
|
-5.29 |
-3.61 |
|
LNPYRPHH |
11.22
|
-6.57 |
-4.88 |
| Q03497 |
GKFIPSRP |
8.13
|
-5.61 |
-3.93 |
|
APTTPNRT |
10.87
|
-7.32 |
-5.63 |
|
LPPIPPTK |
11.89
|
-6.57 |
-4.88 |
| P08018 |
RAPRRPLS |
10.11
|
-11.53 |
-9.84 |
|
STQHPTRP |
11.14
|
-4.49 |
-2.81 |
|
RPNVAPHK |
12.49
|
-7.71 |
-6.03 |
| Q12469 |
ELKPFPRP |
10.99
|
-2.88 |
-1.19 |
|
LKPFPRPS |
11.98
|
-7.09 |
-5.40 |
|
KPFPRPSD |
14.75
|
-4.64 |
-2.95 |
|
