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Matrix information:
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ADAN-name: NBP2_1SEM-12.PDB
Scoring matrix: NBP2_1SEM-12_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 10.34
Foldx random average score for Saccharomyces cerevisiae: 8.164 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2181610
Proteins after random average filtering: 5078
Total fragments: 871711
Proteins after disorder filtering: 3091
Total fragments: 47348
Proteins after pattern filtering: 1536
Total fragments: 10045
Proteins after MINT filtering: 6
Total fragments: 132
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
10.34
|
-2.07 |
0.00 |
| Best peptides |
RYMMRMWK |
0.00
|
-5.52 |
-3.45 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
PSYPSIFR |
4.67
|
-4.08 |
-2.01 |
|
SSPPPIPK |
4.69
|
-3.31 |
-1.24 |
|
RSKPLPPQ |
4.92
|
-4.16 |
-2.09 |
| P53933 |
RRRPPPPP |
4.07
|
-4.88 |
-2.81 |
|
VAPPPLPN |
4.77
|
-4.52 |
-2.45 |
|
DLPMELPH |
4.84
|
-4.03 |
-1.96 |
| P48562 |
VAKPKKPA |
4.93
|
-4.25 |
-2.18 |
|
PYRPHHNM |
5.45
|
-4.80 |
-2.73 |
|
IGPAPRPP |
5.59
|
-4.03 |
-1.96 |
| Q03497 |
KVKPSKPE |
4.53
|
-3.90 |
-1.83 |
|
KSFPSKNP |
5.31
|
-3.44 |
-1.37 |
|
HKPKVKPS |
5.60
|
-3.80 |
-1.73 |
| P08018 |
DGPPPRLP |
5.18
|
-4.49 |
-2.42 |
|
GPPPRLPS |
5.22
|
-5.00 |
-2.93 |
|
TQHPTRPN |
5.24
|
-7.48 |
-5.41 |
| Q12469 |
ELKPFPRP |
4.90
|
-3.61 |
-1.54 |
|
LKPFPRPS |
5.19
|
-4.67 |
-2.60 |
|
KPFPRPSD |
6.18
|
-3.87 |
-1.80 |
|
