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Matrix information:
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ADAN-name: NBP2_1SEM-11.PDB
Scoring matrix: NBP2_1SEM-11_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAA
Foldx wt ligand score: 16.85
Foldx random average score for Saccharomyces cerevisiae: 13.219 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2186688
Proteins after random average filtering: 5078
Total fragments: 923433
Proteins after disorder filtering: 3135
Total fragments: 50345
Proteins after pattern filtering: 1439
Total fragments: 6585
Proteins after MINT filtering: 6
Total fragments: 85
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAA |
16.85
|
-0.67 |
0.00 |
| Best peptides |
RRKRHPR |
0.00
|
-9.66 |
-8.99 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
YPQTPSY |
8.85
|
-6.76 |
-6.09 |
|
RRYPQTP |
9.10
|
-6.45 |
-5.78 |
|
EPSTPSR |
9.48
|
-5.10 |
-4.43 |
| P53933 |
RRRPPPP |
7.01
|
-9.15 |
-8.48 |
|
RRPPPPP |
7.25
|
-7.41 |
-6.74 |
|
PPPLPNR |
8.50
|
-7.14 |
-6.47 |
| P48562 |
RGPMHPN |
8.04
|
-6.97 |
-6.30 |
|
KPPISAP |
8.96
|
-5.34 |
-4.67 |
|
NPYRPHH |
8.97
|
-7.35 |
-6.68 |
| Q03497 |
IPSRPAP |
8.16
|
-7.71 |
-7.04 |
|
FPSKNPL |
8.50
|
-6.47 |
-5.80 |
|
KPSKPEA |
9.13
|
-6.71 |
-6.04 |
| P08018 |
RAPRRPL |
7.67
|
-9.35 |
-8.68 |
|
APRRPLS |
9.93
|
-6.69 |
-6.02 |
|
HPTRPNV |
9.94
|
-9.60 |
-8.93 |
| Q12469 |
LKPFPRP |
9.73
|
-5.98 |
-5.31 |
|
PFPRPSD |
11.85
|
-6.10 |
-5.43 |
|
KPFPRPS |
12.10
|
-4.72 |
-4.05 |
|
