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Matrix information:
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ADAN-name: NBP2_1SEM-10.PDB
Scoring matrix: NBP2_1SEM-10_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 14.75
Foldx random average score for Saccharomyces cerevisiae: 14.597 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2181610
Proteins after random average filtering: 5078
Total fragments: 1020375
Proteins after disorder filtering: 3226
Total fragments: 57336
Proteins after pattern filtering: 1514
Total fragments: 7854
Proteins after MINT filtering: 7
Total fragments: 100
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
14.75
|
-1.02 |
0.00 |
| Best peptides |
RPRRCRWP |
0.00
|
-5.99 |
-4.97 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RPVPPDSS |
10.27
|
-4.82 |
-3.80 |
|
FPNLTPNS |
10.45
|
-3.75 |
-2.73 |
|
RSKPLPPQ |
10.65
|
-4.00 |
-2.98 |
| P53933 |
RPPPPPIP |
8.25
|
-6.08 |
-5.06 |
|
RRRPPPPP |
10.20
|
-6.01 |
-4.99 |
|
RVAPPPLP |
11.05
|
-4.82 |
-3.80 |
| P48562 |
QFPRGPMH |
8.38
|
-4.42 |
-3.40 |
|
SAPRAPYP |
9.14
|
-3.77 |
-2.75 |
|
NPYRPHHN |
9.84
|
-3.72 |
-2.70 |
| Q03497 |
FPSKNPLK |
7.79
|
-2.87 |
-1.85 |
|
RPAPKPPS |
9.84
|
-6.37 |
-5.35 |
|
KPKVKPSK |
10.24
|
-2.93 |
-1.91 |
| Q12469 |
KPFPRPSD |
10.65
|
-2.66 |
-1.64 |
|
RLAPSAPA |
12.40
|
-3.58 |
-2.56 |
|
PSAPATKN |
12.40
|
-2.52 |
-1.50 |
| P25293 |
TPHNTPAS |
13.73
|
-1.74 |
-0.72 |
| P08018 |
RPNVAPHK |
5.00
|
-7.07 |
-6.05 |
|
RAPRRPLS |
6.81
|
-7.15 |
-6.13 |
|
PPPRLPSD |
9.71
|
-3.53 |
-2.51 |
|
