|
Matrix information:
(Help) ADAN-name: NBP2_1SEM-1.PDB Scoring matrix: NBP2_1SEM-1_mat Uniprot code: Q12163 Genome source: Saccharomyces cerevisiae Wild-type ligand: AAAAAAAAAA Foldx wt ligand score: 24.55 Foldx random average score for Saccharomyces cerevisiae: 21.263 Available information for Q12163 in MINT (Nov 2008): Nš of interacting proteins: 10 Proteins belonging to other specie: 0 Nš of interactions described: 20 Interactions with other species: 0
Genome scanning information:
Subcellular location: True Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 5078 Total fragments: 2171454 Proteins after random average filtering: 5078 Total fragments: 1230335 Proteins after disorder filtering: 3069 Total fragments: 68587 Proteins after pattern filtering: 1599 Total fragments: 16016 Proteins after MINT filtering: 7 Total fragments: 184
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAAA |
24.55
|
-2.83 |
0.00 |
| Best peptides |
WPRHRRRHRR |
0.00
|
-8.19 |
-5.36 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
SPSYPSIFRR |
10.63
|
-5.97 |
-3.14 |
|
EPSTPSRPVP |
13.15
|
-6.06 |
-3.23 |
|
APKREAPKPP |
14.63
|
-8.95 |
-6.12 |
| P53933 |
VRTRRRPPPP |
13.41
|
-11.86 |
-9.03 |
|
PPPLPNRQLP |
14.77
|
-10.01 |
-7.18 |
|
RVAPPPLPNR |
15.54
|
-9.09 |
-6.26 |
| P48562 |
PPISAPRAPY |
12.40
|
-12.39 |
-9.56 |
|
SPLNPYRPHH |
12.94
|
-9.24 |
-6.41 |
|
TNGQFPRGPM |
14.04
|
-9.89 |
-7.06 |
| Q03497 |
HKQHKPKVKP |
12.67
|
-7.88 |
-5.05 |
|
IPSRPAPKPP |
12.97
|
-9.06 |
-6.23 |
|
HKPKVKPSKP |
13.70
|
-8.89 |
-6.06 |
| Q12469 |
LKPFPRPSDD |
16.01
|
-8.55 |
-5.72 |
|
ELKPFPRPSD |
16.48
|
-9.82 |
-6.99 |
|
RPHRLAPSAP |
16.67
|
-9.44 |
-6.61 |
| P25293 |
TPHNTPASVL |
19.95
|
-6.39 |
-3.56 |
|
APTPHNTPAS |
20.93
|
-4.90 |
-2.07 |
|
NAPTPHNTPA |
21.24
|
-5.20 |
-2.37 |
| P08018 |
PLSTQHPTRP |
13.56
|
-9.76 |
-6.93 |
|
PPPRLPSDKF |
14.92
|
-7.53 |
-4.70 |
|
HPTRPNVAPH |
16.70
|
-8.45 |
-5.62 |
|