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Matrix information:
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ADAN-name: NBP2_1GCQ-9.PDB
Scoring matrix: NBP2_1GCQ-9_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAA
Foldx wt ligand score: 20.46
Foldx random average score for Saccharomyces cerevisiae: 16.596 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2181610
Proteins after random average filtering: 5078
Total fragments: 891915
Proteins after disorder filtering: 2975
Total fragments: 37129
Proteins after pattern filtering: 1442
Total fragments: 7816
Proteins after MINT filtering: 6
Total fragments: 97
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
20.46
|
-2.58 |
0.00 |
| Best peptides |
RRWRPPKW |
0.00
|
-12.42 |
-9.84 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
TPSRPVPP |
9.34
|
-7.80 |
-5.22 |
|
KRSKPLPP |
11.14
|
-7.88 |
-5.30 |
|
YPQTPSYY |
11.57
|
-6.77 |
-4.19 |
| P53933 |
TRRRPPPP |
7.80
|
-8.99 |
-6.41 |
|
RVAPPPLP |
10.77
|
-9.28 |
-6.70 |
|
RPPPPPIP |
10.89
|
-10.96 |
-8.38 |
| P48562 |
QFPRGPMH |
7.84
|
-9.50 |
-6.92 |
|
NPYRPHHN |
9.40
|
-7.72 |
-5.14 |
|
APKRPDAD |
9.72
|
-8.01 |
-5.43 |
| Q03497 |
IPSRPAPK |
8.11
|
-9.21 |
-6.63 |
|
PKVKPSKP |
11.08
|
-7.89 |
-5.31 |
|
FPSKNPLK |
12.04
|
-6.35 |
-3.77 |
| P08018 |
RAPRRPLS |
6.72
|
-10.71 |
-8.13 |
|
HPTRPNVA |
9.07
|
-10.12 |
-7.54 |
|
APRRPLST |
9.27
|
-8.18 |
-5.60 |
| Q12469 |
PFPRPSDD |
11.08
|
-7.11 |
-4.53 |
|
LKPFPRPS |
13.18
|
-6.50 |
-3.92 |
|
ELKPFPRP |
14.80
|
-6.10 |
-3.52 |
|
