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Matrix information:
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ADAN-name: NBP2_1GCQ-25.PDB
Scoring matrix: NBP2_1GCQ-25_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 17.54
Foldx random average score for Saccharomyces cerevisiae: 14.154 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5077
Total fragments: 962257
Proteins after disorder filtering: 2942
Total fragments: 39998
Proteins after pattern filtering: 1451
Total fragments: 8426
Proteins after MINT filtering: 6
Total fragments: 100
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
17.54
|
-0.93 |
0.00 |
| Best peptides |
HRKPIPPRN |
0.00
|
-10.26 |
-9.33 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RSKPLPPQL |
8.70
|
-6.18 |
-5.25 |
|
RYPQTPSYY |
9.10
|
-7.94 |
-7.01 |
|
REAPKPPAN |
9.38
|
-4.43 |
-3.50 |
| P53933 |
APPPLPNRQ |
6.31
|
-8.95 |
-8.02 |
|
RRRPPPPPI |
7.95
|
-9.70 |
-8.77 |
|
RRPPPPPIP |
10.17
|
-10.52 |
-9.59 |
| P48562 |
LNPYRPHHN |
6.59
|
-7.35 |
-6.42 |
|
PYRPHHNMI |
9.41
|
-7.89 |
-6.96 |
|
PRGPMHPNN |
9.43
|
-8.80 |
-7.87 |
| Q03497 |
PLPPIPPTK |
8.28
|
-7.25 |
-6.32 |
|
SFPSKNPLK |
8.38
|
-6.86 |
-5.93 |
|
VKPSKPEAK |
8.81
|
-8.01 |
-7.08 |
| P08018 |
TRPNVAPHK |
7.21
|
-10.18 |
-9.25 |
|
PRRPLSTQH |
8.88
|
-9.40 |
-8.47 |
|
RAPRRPLST |
11.20
|
-6.35 |
-5.42 |
| Q12469 |
ELKPFPRPS |
8.81
|
-5.61 |
-4.68 |
|
APSAPATKN |
12.57
|
-1.71 |
-0.78 |
|
KPFPRPSDD |
12.99
|
-4.39 |
-3.46 |
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