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Matrix information:
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ADAN-name: NBP2_1GCQ-21.PDB
Scoring matrix: NBP2_1GCQ-21_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAGGAAAA
Foldx wt ligand score: 20.05
Foldx random average score for Saccharomyces cerevisiae: 18.412 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2171454
Proteins after random average filtering: 5078
Total fragments: 1231693
Proteins after disorder filtering: 2999
Total fragments: 48549
Proteins after pattern filtering: 1142
Total fragments: 3015
Proteins after MINT filtering: 6
Total fragments: 37
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAGGAAAA |
20.05
|
-1.17 |
0.00 |
| Best peptides |
EWRMGRPTRR |
0.00
|
-4.39 |
-3.22 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RSKPLPPQLL |
14.18
|
-3.93 |
-2.76 |
|
RRYPQTPSYY |
15.44
|
-4.38 |
-3.21 |
|
QFPNLTPNST |
15.74
|
-5.91 |
-4.74 |
| P53933 |
VSYPGNPTSR |
11.93
|
-4.77 |
-3.60 |
|
PPPPIPSTQK |
13.90
|
-3.98 |
-2.81 |
|
APPPLPNRQL |
15.28
|
-5.58 |
-4.41 |
| P48562 |
PLNPYRPHHN |
12.51
|
-3.50 |
-2.33 |
|
PYRPHHNMIN |
13.93
|
-6.29 |
-5.12 |
|
PRAPYPSNQN |
14.65
|
-2.57 |
-1.40 |
| Q03497 |
THAPTTPNRT |
13.02
|
-5.30 |
-4.13 |
|
PLPPIPPTKS |
15.74
|
-4.92 |
-3.75 |
|
FPSKNPLKNS |
16.64
|
-2.94 |
-1.77 |
| P08018 |
TQHPTRPNVA |
15.05
|
-2.84 |
-1.67 |
|
GPPPRLPSDK |
17.07
|
-2.46 |
-1.29 |
|
RAPRRPLSTQ |
17.39
|
-5.88 |
-4.71 |
| Q12469 |
RLAPSAPATK |
14.83
|
-3.56 |
-2.39 |
|
LAPSAPATKN |
17.60
|
-2.75 |
-1.58 |
|
PSAPATKNHD |
17.98
|
-3.85 |
-2.68 |
|
