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Matrix information:
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ADAN-name: NBP2_1GCQ-20.PDB
Scoring matrix: NBP2_1GCQ-20_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.93
Foldx random average score for Saccharomyces cerevisiae: 14.455 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5078
Total fragments: 883445
Proteins after disorder filtering: 3062
Total fragments: 45898
Proteins after pattern filtering: 1338
Total fragments: 5026
Proteins after MINT filtering: 6
Total fragments: 62
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
15.93
|
-3.29 |
0.00 |
| Best peptides |
RRPFPGRHW |
0.00
|
-8.21 |
-4.92 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
YPQTPSYYY |
7.05
|
-6.18 |
-2.89 |
|
KRSKPLPPQ |
9.51
|
-9.99 |
-6.70 |
|
RPVPPDSSY |
9.81
|
-10.35 |
-7.06 |
| P53933 |
PPPIPSTQK |
11.53
|
-6.14 |
-2.85 |
|
VAPPPLPNR |
14.30
|
-5.86 |
-2.57 |
| P48562 |
NPYRPHHNM |
7.85
|
-10.76 |
-7.47 |
|
MRQAPKRPD |
10.82
|
-6.95 |
-3.66 |
|
GQFPRGPMH |
11.12
|
-4.74 |
-1.45 |
| Q03497 |
KPSKPEAKS |
10.19
|
-7.06 |
-3.77 |
|
HKPKVKPSK |
10.97
|
-6.89 |
-3.60 |
|
KKSFPSKNP |
11.31
|
-9.35 |
-6.06 |
| P08018 |
APRRPLSTQ |
10.11
|
-8.18 |
-4.89 |
|
TRPNVAPHK |
10.65
|
-6.48 |
-3.19 |
|
PRLPSDKFS |
11.75
|
-6.12 |
-2.83 |
| Q12469 |
LKPFPRPSD |
10.15
|
-6.35 |
-3.06 |
|
PFPRPSDDD |
13.24
|
-5.53 |
-2.24 |
|
RLAPSAPAT |
13.44
|
-6.71 |
-3.42 |
|
