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Matrix information:
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ADAN-name: NBP2_1GCQ-17.PDB
Scoring matrix: NBP2_1GCQ-17_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 15.82
Foldx random average score for Saccharomyces cerevisiae: 14.514 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5078
Total fragments: 1041286
Proteins after disorder filtering: 3195
Total fragments: 61786
Proteins after pattern filtering: 1436
Total fragments: 6283
Proteins after MINT filtering: 6
Total fragments: 73
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAGAAA |
15.82
|
-2.11 |
0.00 |
| Best peptides |
RPIIPGHSK |
0.00
|
-5.55 |
-3.44 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RPVPPDSSY |
7.28
|
-8.76 |
-6.65 |
|
RTEPSTPSR |
7.87
|
-5.40 |
-3.30 |
|
RRYPQTPSY |
9.70
|
-6.46 |
-4.36 |
| P53933 |
PPPIPSTQK |
9.57
|
-4.90 |
-2.80 |
|
VAPPPLPNR |
13.05
|
-4.70 |
-2.60 |
|
PPPPPIPST |
13.05
|
-4.79 |
-2.69 |
| P48562 |
KPPISAPRA |
7.85
|
-5.75 |
-3.65 |
|
NPYRPHHNM |
9.17
|
-9.58 |
-7.47 |
|
FPRGPMHPN |
9.22
|
-6.31 |
-4.21 |
| Q03497 |
PPIPPTKSK |
7.99
|
-5.95 |
-3.85 |
|
HKPKVKPSK |
9.97
|
-4.65 |
-2.55 |
|
KPSKPEAKS |
10.89
|
-5.94 |
-3.84 |
| P08018 |
APRRPLSTQ |
9.75
|
-6.90 |
-4.79 |
|
PRLPSDKFS |
12.09
|
-3.17 |
-1.06 |
|
STQHPTRPN |
12.45
|
-3.73 |
-1.63 |
| Q12469 |
LKPFPRPSD |
11.10
|
-5.17 |
-3.06 |
|
APSAPATKN |
11.87
|
-4.11 |
-2.01 |
|
RLAPSAPAT |
13.48
|
-4.59 |
-2.48 |
|
