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Matrix information:
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ADAN-name: NBP2_1GCQ-14.PDB
Scoring matrix: NBP2_1GCQ-14_mat
Uniprot code: Q12163
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAA
Foldx wt ligand score: 20.06
Foldx random average score for Saccharomyces cerevisiae: 15.514 Available information for Q12163 in MINT (Nov 2008):
Nš of interacting proteins: 10
Proteins belonging to other specie: 0
Nš of interactions described: 20
Interactions with other species: 0
Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 5078
Total fragments: 2176532
Proteins after random average filtering: 5078
Total fragments: 969335
Proteins after disorder filtering: 2916
Total fragments: 39372
Proteins after pattern filtering: 1338
Total fragments: 5196
Proteins after MINT filtering: 7
Total fragments: 73
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAAA |
20.06
|
-2.52 |
0.00 |
| Best peptides |
IHKRIHKHR |
0.00
|
-9.74 |
-7.22 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
SPSYPSIFR |
9.36
|
-6.49 |
-3.97 |
|
TPSRPVPPD |
12.05
|
-9.28 |
-6.76 |
|
KRSKPLPPQ |
12.31
|
-6.55 |
-4.03 |
| P53933 |
VAPPPLPNR |
12.48
|
-6.98 |
-4.46 |
|
PPPIPSTQK |
13.26
|
-8.44 |
-5.92 |
|
PPPLPNRQL |
13.62
|
-7.39 |
-4.87 |
| P48562 |
NPYRPHHNM |
3.98
|
-12.48 |
-9.96 |
|
APKRPDADV |
8.98
|
-10.13 |
-7.61 |
|
PKPPISAPR |
12.12
|
-7.87 |
-5.35 |
| Q03497 |
HKPKVKPSK |
12.33
|
-6.07 |
-3.55 |
|
FPSKNPLKN |
12.79
|
-6.91 |
-4.39 |
|
LPPIPPTKS |
13.28
|
-9.04 |
-6.52 |
| Q12469 |
PFPRPSDDD |
10.30
|
-9.30 |
-6.78 |
|
LKPFPRPSD |
14.81
|
-3.61 |
-1.09 |
|
HRLAPSAPA |
14.87
|
-2.37 |
0.15 |
| P25293 |
TPHNTPASV |
13.33
|
-4.75 |
-2.23 |
| P08018 |
APRRPLSTQ |
8.33
|
-10.72 |
-8.20 |
|
RAPRRPLST |
9.88
|
-6.15 |
-3.63 |
|
PPPRLPSDK |
10.39
|
-10.38 |
-7.86 |
|
