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Matrix information:
(Help) ADAN-name: NBP2_1GCQ-10.PDB Scoring matrix: NBP2_1GCQ-10_mat Uniprot code: Q12163 Genome source: Saccharomyces cerevisiae Wild-type ligand: AAAAAAAA Foldx wt ligand score: 15.98 Foldx random average score for Saccharomyces cerevisiae: 14.919 Available information for Q12163 in MINT (Nov 2008): Nš of interacting proteins: 10 Proteins belonging to other specie: 0 Nš of interactions described: 20 Interactions with other species: 0
Genome scanning information:
Subcellular location: True Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 2101 Proteins considered as fragments or having non-standard amino acids: 230 Total scanned proteins: 5078 Total fragments: 2181610 Proteins after random average filtering: 5078 Total fragments: 915290 Proteins after disorder filtering: 3236 Total fragments: 64060 Proteins after pattern filtering: 1622 Total fragments: 11705 Proteins after MINT filtering: 7 Total fragments: 140
Prediction of know targets:
| Ligand peptide |
Sequence |
Foldx score |
ΔGbinding |
ΔΔG |
| Reference wt |
AAAAAAAA |
15.98
|
-0.62 |
0.00 |
| Best peptides |
RPRKPRRP |
0.00
|
-10.52 |
-9.90 |
| |
|
|
|
|
| Interactors |
|
|
|
|
| Q01389 |
RPVPPDSS |
7.25
|
-7.43 |
-6.81 |
|
KPLPPQLL |
7.58
|
-5.65 |
-5.03 |
|
EPSTPSRP |
8.78
|
-5.05 |
-4.43 |
| P53933 |
RPPPPPIP |
4.94
|
-9.16 |
-8.54 |
|
RVAPPPLP |
6.08
|
-6.70 |
-6.08 |
|
RRRPPPPP |
7.00
|
-8.38 |
-7.76 |
| P48562 |
MRQAPKRP |
6.88
|
-7.13 |
-6.51 |
|
SPLNPYRP |
7.76
|
-5.67 |
-5.05 |
|
FPRGPMHP |
8.66
|
-5.06 |
-4.44 |
| Q03497 |
GKFIPSRP |
6.53
|
-5.36 |
-4.74 |
|
PKVKPSKP |
7.34
|
-5.43 |
-4.81 |
|
KPSKPEAK |
7.40
|
-5.84 |
-5.22 |
| Q12469 |
PFPRPSDD |
10.48
|
-3.64 |
-3.02 |
|
HRLAPSAP |
10.87
|
-3.99 |
-3.37 |
|
APSAPATK |
11.02
|
-3.53 |
-2.91 |
| P25293 |
PHNTPASV |
13.12
|
-3.19 |
-2.57 |
|
APTPHNTP |
14.12
|
-1.45 |
-0.83 |
|
TPHNTPAS |
14.38
|
-1.83 |
-1.21 |
| P08018 |
APRRPLST |
7.83
|
-5.14 |
-4.52 |
|
PPRLPSDK |
8.55
|
-5.01 |
-4.39 |
|
HPTRPNVA |
8.69
|
-5.09 |
-4.47 |
|