ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-3.PDB
Scoring matrix: MYO5_1ZUY-3_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAAAAAA
Foldx wt ligand score: 18.18
Foldx random average score for Saccharomyces cerevisiae: 17.409

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3199153
Proteins after random average filtering: 7177
 Total fragments: 1400560
Proteins after disorder filtering: 4505
 Total fragments: 85445
Proteins after pattern filtering: 2288
 Total fragments: 16680
Proteins after MINT filtering: 44
 Total fragments: 1011

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAAAAAA

18.18

4.90

0.00

Best peptides

PKKRKFWPMR

0.00

-0.77

-5.67

         
Interactors      
P53145

PLLPPLPGQP

13.32

-5.39

-10.29

PNEPLLPPLP

13.65

-4.66

-9.56

PPLPGQPPLI

14.05

-5.59

-10.49

P39113

PLGAPPPPPH

8.47

-5.18

-10.08

SHRGPRRPQK

9.73

-4.85

-9.75

SPLGAPPPPP

9.96

-7.67

-12.57

P40073

QFDGYPQQQP

13.98

-5.67

-10.57

P25604

PHLKPPLPPP

8.44

-6.59

-11.49

PKSPHLKPPL

10.82

-3.38

-8.28

PKPKSPHLKP

11.11

-5.95

-10.85

P25623

PPHATPKNVD

10.88

-6.74

-11.64

SKTKPLPVEP

11.06

-4.87

-9.77

PPLPPHATPK

12.35

-5.80

-10.70

Q05933

TKFRGPAYPS

11.12

-3.75

-8.65

FRGPAYPSNS

14.03

-3.56

-8.46

PGTPGFPLNN

14.16

-3.57

-8.47

P53094

PQTREPNEPP

8.39

-4.92

-9.82

YPLKLPPLPL

11.29

-6.11

-11.01

FKSSAFPQSP

11.59

-4.43

-9.33

Q12451

APKHAPPPVP

9.89

-8.08

-12.98

PKHAPPPVPN

10.02

-4.79

-9.69

QPHLLPWLPP

12.48

-8.77

-13.67

P15891

PRRATPEKKP

8.55

-6.42

-11.32

RSSAAPPPPP

11.09

-6.56

-11.46

RRATPEKKPK

11.46

-4.65

-9.55

P48562

PPISAPRAPY

9.97

-6.51

-11.41

PTNGQFPRGP

10.06

-4.80

-9.70

PYSKQPQSPL

10.27

-4.20

-9.10

P40341

SRNIPPPPPP

11.69

-5.80

-10.70

RNIPPPPPPP

11.98

-6.87

-11.77

PPLNDPSNPV

12.61

-5.78

-10.68

Q08912

PKGPPPPPPP

7.94

-6.30

-11.20

HPKGPPPPPP

9.27

-8.00

-12.90

THGDHPKGPP

11.51

-6.01

-10.91

P17555

SKSGPPPRPK

9.19

-4.67

-9.57

RPKKPSTLKT

11.74

-4.49

-9.39

PPRPKKPSTL

11.83

-5.76

-10.66

Q12342

RKAKAPPPPP

5.79

-6.51

-11.41

AKAPPPPPPP

11.07

-5.42

-10.32

KAKAPPPPPP

11.58

-6.76

-11.66

P47068

MPNTAPPLPR

10.27

-7.03

-11.93

PPALSAPSVP

10.68

-6.42

-11.32

PLPRAPPVPP

11.02

-6.28

-11.18

P38822

DRGPAPEVPP

12.96

-4.33

-9.23

APEVPPPRRS

13.94

-6.57

-11.47

PAPEVPPPRR

14.93

-5.64

-10.54

P04050

PPVRPSISFN

10.83

-3.66

-8.56

SPSYSPTSPG

13.35

-4.53

-9.43

LPVPPPPVRP

13.49

-8.40

-13.30

P40450

PQLPPPPPPP

11.29

-5.94

-10.84

TCGAVPPPPP

12.25

-6.05

-10.95

SPKLFPRLSS

12.91

-4.37

-9.27

P40453

RLRKRPPPPP

6.37

-7.65

-12.55

LRKRPPPPPP

7.00

-7.46

-12.36

PPSWKPPDLP

7.60

-7.70

-12.60

Q12168

TTNRGPPPLP

10.67

-7.96

-12.86

TNRGPPPLPP

11.55

-6.84

-11.74

NKVQHPVPKP

12.38

-6.91

-11.81

P41832

PKGETPPPPP

7.79

-6.28

-11.18

VLSSQPPPPP

11.53

-6.64

-11.54

SPAPPPPPPP

12.02

-8.14

-13.04

P36006

PPMGQPKDPK

6.96

-7.09

-11.99

PKDPKFEAAY

10.15

-3.56

-8.46

SKSNKKPKNP

11.31

-4.03

-8.93

P38753

YPSNLPIQHP

13.38

-5.66

-10.56

PPVPGPALYA

13.69

-4.59

-9.49

AHISPPVPGP

13.73

-5.13

-10.03

P38237

DLNDPFVPPP

12.64

-4.73

-9.63

PFVPPPNVPK

13.93

-4.51

-9.41

DPFVPPPNVP

13.93

-7.39

-12.29

P34245

PFGPWPGPAE

13.16

-4.77

-9.67

TPFGPWPGPA

13.47

-5.29

-10.19

AYSTPFGPWP

14.22

-4.44

-9.34

Q01389

APKREAPKPP

8.57

-7.34

-12.24

PKREAPKPPA

9.27

-4.82

-9.72

KRSKPLPPQL

10.19

-3.54

-8.44

Q03306

PRTKPNVPPL

8.72

-2.85

-7.75

RNKSIPRTKP

10.22

-6.76

-11.66

MNGRLPNSAP

10.45

-5.69

-10.59

P34758

PQHLPPPPPP

10.10

-6.30

-11.20

QPQHLPPPPP

13.21

-8.15

-13.05

QHLPPPPPPR

13.28

-5.82

-10.72

P53933

RTRRRPPPPP

7.14

-6.98

-11.88

VRTRRRPPPP

7.65

-6.89

-11.79

TRRRPPPPPI

8.40

-6.34

-11.24

P32381

LLTEPPMNPL

14.07

-6.44

-11.34

ILLTEPPMNP

14.35

-6.07

-10.97

Q00453

PPYFPHPMPS

11.50

-5.91

-10.81

PYFPHPMPSA

13.23

-4.81

-9.71

PLPHQPPPLP

13.40

-5.43

-10.33

P40021

KNTGPPPPLP

10.87

-6.08

-10.98

TKNTGPPPPL

11.65

-5.73

-10.63

PTKNTGPPPP

12.57

-3.07

-7.97

P36150

NPIVVNPSSP

15.74

-5.72

-10.62

PIVVNPSSPS

16.26

-3.76

-8.66

Q12446

PPRRGPAPPP

5.92

-8.14

-13.04

PRRGPAPPPP

7.33

-4.87

-9.77

TKHKAPPPPP

8.03

-6.87

-11.77

Q01560

PPEPQPYYPP

10.98

-7.13

-12.03

PQESAPQEPP

11.98

-4.95

-9.85

PQAPDAPQEP

12.56

-4.38

-9.28

P00950

RRSFDVPPPP

12.54

-5.96

-10.86

RSFDVPPPPI

13.79

-4.32

-9.22

SFDVPPPPID

16.78

-5.89

-10.79

P53735

APKLVPPPPR

9.31

-6.53

-11.43

PKLVPPPPRT

10.64

-4.60

-9.50

KLVPPPPRTR

12.42

-6.46

-11.36

P33334

MPTRFPPAVF

7.72

-7.50

-12.40

PGGPKFEPLY

11.92

-2.35

-7.25

IPGGPKFEPL

12.12

-5.15

-10.05

P40523

PPHGPFSTSM

9.86

-5.44

-10.34

PPLAPPPHGP

10.72

-7.41

-12.31

PPGTVPNMQM

10.86

-6.08

-10.98

P40563

PKRRAPPPVP

4.12

-7.52

-12.42

PSERPKRRAP

9.61

-4.36

-9.26

RRAPPPVPKK

10.66

-4.79

-9.69

Q08989

PKGPPPPPPP

7.94

-6.30

-11.20

HPKGPPPPPP

9.27

-8.00

-12.90

GTNGDHPKGP

12.78

-4.53

-9.43

P37370

PQNRPHMPSV

7.97

-3.99

-8.89

PLAPLPPPPP

9.42

-6.65

-11.55

PTSHAPPLPP

10.16

-5.01

-9.91

P39743

PNATIPEDNP

11.79

-4.84

-9.74

PAYSNPLTSP

14.53

-5.30

-10.20

Q03900

TPSGAPKLKN

10.94

-6.73

-11.63

PSGAPKLKNY

14.52

-2.39

-7.29

PNTPSGAPKL

15.40

-1.61

-6.51

 


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