ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-20.PDB
Scoring matrix: MYO5_1ZUY-20_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 18.57
Foldx random average score for Saccharomyces cerevisiae: 17.773

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206331
Proteins after random average filtering: 7178
 Total fragments: 1356271
Proteins after disorder filtering: 4498
 Total fragments: 65635
Proteins after pattern filtering: 1967
 Total fragments: 6766
Proteins after MINT filtering: 40
 Total fragments: 299

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

18.57

-0.68

0.00

Best peptides

RMFMRGRHF

0.00

-8.36

-7.68

         
Interactors      
P53145

LPPLPGQPP

15.84

-6.78

-6.10

PGQPPLINI

15.91

-5.63

-4.95

PLLPPLPGQ

17.36

-5.42

-4.74

P39113

PRRPQKNRY

11.91

-7.03

-6.35

FTHPEGPNC

12.30

-5.50

-4.82

PPPPHKDHL

13.33

-4.62

-3.94

P40073

GYPQQQPSH

17.13

-3.97

-3.29

P25604

PPKPKSPHL

12.99

-5.38

-4.70

KPKSPHLKP

14.77

-6.04

-5.36

HLKPPLPPP

15.48

-8.10

-7.42

P25623

PVEPASPSI

17.57

-4.67

-3.99

Q05933

PVDPNTDRM

13.84

-4.87

-4.19

TPGFPLNNV

16.16

-4.97

-4.29

FTLPGTPGF

16.18

-5.05

-4.37

P53094

DEDPVSPKP

14.57

-5.77

-5.09

FPQSPIRAY

15.91

-5.31

-4.63

PLPPQTREP

15.93

-4.97

-4.29

Q12451

AAPKHAPPP

16.17

-6.12

-5.44

HLLPWLPPT

16.42

-5.55

-4.87

HAPPPVPNE

17.17

-5.16

-4.48

P15891

RRATPEKKP

12.09

-6.71

-6.03

ISPKPFSKP

13.83

-6.59

-5.91

QPPLPSRNV

14.71

-5.60

-4.92

P48562

PLNPYRPHH

11.98

-5.31

-4.63

GQFPRGPMH

12.40

-6.83

-6.15

NPYRPHHNM

12.44

-7.54

-6.86

Q08912

YTPSWGPSP

12.93

-5.53

-4.85

GDHPKGPPP

16.23

-5.88

-5.20

VCYTPSWGP

17.70

-4.69

-4.01

P17555

RPKKPSTLK

14.75

-5.97

-5.29

SGPPPRPKK

15.52

-4.81

-4.13

PKKPSTLKT

16.87

-4.44

-3.76

P47068

NTAPPLPRA

14.63

-4.85

-4.17

YHPMPNTAP

14.79

-8.22

-7.54

PFVDPSSNP

15.08

-4.07

-3.39

P38822

RGPAPEVPP

17.06

-6.00

-5.32

P04050

SYSPTSPNY

13.26

-3.92

-3.24

NYSPTSPSY

14.99

-4.54

-3.86

SPTSPGYSP

15.64

-3.18

-2.50

P40450

SSPKLFPRL

12.18

-5.56

-4.88

LVTPPAPPL

16.75

-6.96

-6.28

PKLFPRLSS

17.45

-4.51

-3.83

P40453

PDLPIRLRK

14.14

-4.58

-3.90

VPEPPSWKP

15.04

-6.23

-5.55

WKPPDLPIR

15.95

-6.13

-5.45

Q12168

QHPVPKPNI

15.12

-6.34

-5.66

NDDPYFPQF

15.28

-6.79

-6.11

DPYFPQFRS

15.56

-2.81

-2.13

P41832

PPPPPMALF

17.11

-7.22

-6.54

P36006

MGQPKDPKF

12.53

-6.53

-5.85

PPPMGQPKD

17.49

-3.57

-2.89

KPKNPGGLS

17.55

-3.62

-2.94

P38753

SPPVPGPAL

15.74

-4.15

-3.47

PSNLPIQHP

16.26

-5.78

-5.10

HISPPVPGP

16.99

-6.88

-6.20

P38237

VPPPNVPKK

17.18

-4.25

-3.57

P34245

YSTPFGPWP

11.97

-6.08

-5.40

FGPWPGPAE

17.54

-3.25

-2.57

PWPGPAECL

17.73

-3.94

-3.26

Q01389

RRYPQTPSY

12.95

-6.05

-5.37

RPVPPDSSY

14.32

-7.45

-6.77

YPQTPSYYY

14.48

-6.97

-6.29

Q03306

NKSIPRTKP

12.62

-7.07

-6.39

SIPRTKPNV

14.70

-5.61

-4.93

GEEKPFRIP

14.88

-6.23

-5.55

P34758

HSQPNKPNY

11.76

-6.41

-5.73

LSSSPSPNP

14.09

-4.66

-3.98

QPNKPNYGM

16.67

-6.98

-6.30

P53933

VAPPPLPNR

14.10

-5.64

-4.96

PPIPSTQKP

16.70

-4.93

-4.25

YNDLPMELP

16.92

-8.35

-7.67

P32381

LTEPPMNPL

17.48

-5.86

-5.18

Q00453

YAPPYFPHP

10.28

-8.18

-7.50

SAPIPLPHQ

13.08

-5.16

-4.48

HQPPPLPIY

15.40

-7.09

-6.41

P40021

SHPPNHPHS

13.69

-3.57

-2.89

PSTPSQMNY

15.00

-4.63

-3.95

PLPPPARSQ

15.26

-6.28

-5.60

Q12446

PPPPPHRHV

12.38

-7.67

-6.99

RPLPQLPNR

12.60

-4.81

-4.13

PPPPRASRP

12.89

-5.91

-5.23

Q01560

PPPPPGEHM

11.09

-6.46

-5.78

HHQPPEPQP

16.08

-5.97

-5.29

QPPEPQPYY

16.64

-5.29

-4.61

P53735

PPPPRTRSP

14.47

-5.02

-4.34

VPPPPRTRS

15.89

-4.93

-4.25

P33334

NAIPGGPKF

10.87

-6.58

-5.90

LFFDPSLNP

12.80

-4.26

-3.58

PSLNPIPHF

13.58

-5.35

-4.67

P40523

LGAPPGTVP

14.20

-5.82

-5.14

LAPPPHGPF

15.16

-7.36

-6.68

APPPHGPFS

16.64

-1.66

-0.98

P40563

PSERPKRRA

12.46

-4.24

-3.56

GMVNPGQLP

14.81

-5.79

-5.11

RAPPPVPKK

15.04

-6.77

-6.09

Q08989

GDHPKGPPP

16.23

-5.88

-5.20

P37370

RPHMPSVRP

9.64

-7.91

-7.23

KVPQNRPHM

10.59

-6.32

-5.64

VSQMPKPRP

12.11

-7.27

-6.59

P39743

NATIPEDNP

13.72

-6.00

-5.32

Q03900

NTPSGAPKL

16.32

-3.86

-3.18

 


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