ADAN database

 

Scanning Information and Binding Energy of Known Targets

Matrix information:                                                    (Help)
ADAN-name: MYO5_1ZUY-17.PDB
Scoring matrix: MYO5_1ZUY-17_mat
Uniprot code: Q04439
Genome source: Saccharomyces cerevisiae
Wild-type ligand: AAAAAGAAA
Foldx wt ligand score: 17.97
Foldx random average score for Saccharomyces cerevisiae: 18.538

Available information for Q04439 in MINT (Nov 2008):
Nš of interacting proteins: 61
 Proteins belonging to other specie: 0
Nš of interactions described: 108
 Interactions with other species: 0

Genome scanning information:
Subcellular location: True
Proteins in genome Saccharomyces cerevisiae: 7409
Proteins located in other compartments: 1
Proteins considered as fragments or having non-standard amino acids: 230
Total scanned proteins: 7178
 Total fragments: 3206331
Proteins after random average filtering: 7178
 Total fragments: 1333373
Proteins after disorder filtering: 4497
 Total fragments: 64560
Proteins after pattern filtering: 1931
 Total fragments: 6253
Proteins after MINT filtering: 39
 Total fragments: 250

Prediction of know targets:

Ligand peptide Sequence Foldx score ΔGbinding ΔΔG
Reference wt

AAAAAGAAA

17.97

-2.34

0.00

Best peptides

RRWMRGRHY

0.00

-8.51

-6.17

         
Interactors      
P53145

PGQPPLINI

16.38

-4.91

-2.57

PLLPPLPGQ

17.14

-3.83

-1.49

P39113

HRGPRRPQK

11.55

-4.77

-2.43

FTHPEGPNC

13.47

-4.51

-2.17

PRRPQKNRY

13.54

-4.82

-2.48

P25604

PPKPKSPHL

14.05

-5.33

-2.99

LPPKPNTQL

16.98

-6.47

-4.13

QNTPPLPPK

17.04

-5.11

-2.77

P25623

SDTPPLPPH

17.78

-4.71

-2.37

KPLPVEPAS

18.20

-2.18

0.16

Q05933

LPGTPGFPL

15.44

-3.48

-1.14

PVDPNTDRM

15.91

-4.17

-1.83

FTLPGTPGF

16.41

-4.13

-1.79

P53094

FPQSPIRAY

14.65

-5.71

-3.37

TREPNEPPP

16.82

-5.08

-2.74

LKLPPLPLT

17.25

-4.21

-1.87

Q12451

HLLPWLPPT

17.23

-5.18

-2.84

P15891

RRATPEKKP

12.81

-6.89

-4.55

PPPPPRRAT

16.58

-5.69

-3.35

RATPEKKPK

16.68

-3.90

-1.56

P48562

PLNPYRPHH

12.05

-3.92

-1.58

KPPISAPRA

14.00

-2.96

-0.62

NPYRPHHNM

14.15

-7.21

-4.87

Q08912

YTPSWGPSP

15.32

-5.89

-3.55

GDHPKGPPP

17.06

-5.50

-3.16

P17555

SGPPPRPKK

15.28

-4.27

-1.93

RPKKPSTLK

15.44

-6.63

-4.29

PPAPPASVF

18.28

-5.52

-3.18

P47068

PSSNPFFRK

15.12

-2.57

-0.23

NTAPPLPRA

15.31

-3.14

-0.80

YHPMPNTAP

15.61

-7.36

-5.02

P38822

RGPAPEVPP

17.74

-7.16

-4.82

P04050

SYSPTSPNY

15.36

-2.36

-0.02

NYSPTSPSY

16.30

-4.74

-2.40

TYSPTSPAY

16.65

-2.04

0.30

P40450

SSPKLFPRL

13.87

-4.33

-1.99

LVTPPAPPL

16.87

-6.63

-4.29

PPAPPLPNG

18.17

-3.33

-0.99

P40453

PDLPIRLRK

11.99

-3.97

-1.63

AWDCPRCGP

17.45

-4.07

-1.73

EIPPPLPPK

17.52

-5.99

-3.65

Q12168

QHPVPKPNI

14.79

-5.14

-2.80

NDDPYFPQF

15.00

-4.54

-2.20

PPLPPRANV

15.34

-5.31

-2.97

P41832

PPPPPMALF

18.36

-5.93

-3.59

P36006

MGQPKDPKF

15.33

-5.52

-3.18

PPPPMGQPK

17.31

-3.27

-0.93

KPKNPGGLS

17.57

-2.81

-0.47

P38753

SPPVPGPAL

14.43

-4.66

-2.32

PSNLPIQHP

17.92

-4.80

-2.46

NLPIQHPTN

17.93

-5.38

-3.04

P38237

NFQIPSKPE

17.40

-2.76

-0.42

FVPPPNVPK

18.04

-5.26

-2.92

P34245

YSTPFGPWP

13.76

-5.44

-3.10

FGPWPGPAE

15.31

-3.72

-1.38

PWPGPAECL

17.81

-2.71

-0.37

Q01389

RRYPQTPSY

12.05

-5.77

-3.43

RPVPPDSSY

14.37

-6.47

-4.13

KRSKPLPPQ

14.64

-5.45

-3.11

Q03306

NKSIPRTKP

14.13

-5.12

-2.78

RQPTPSPPL

15.26

-8.16

-5.82

SIPRTKPNV

16.84

-5.33

-2.99

P34758

HSQPNKPNY

12.96

-5.76

-3.42

QQLPLEPLK

15.85

-2.71

-0.37

QPNKPNYGM

16.03

-4.90

-2.56

P53933

VAPPPLPNR

15.17

-4.87

-2.53

NDLPMELPH

16.48

-2.50

-0.16

PPPIPSTQK

17.74

-3.82

-1.48

P32381

LTEPPMNPL

18.32

-5.33

-2.99

Q00453

SAPIPLPHQ

12.50

-3.58

-1.24

YAPPYFPHP

12.65

-6.13

-3.79

HQPPPLPIY

15.48

-5.85

-3.51

P40021

SHPPNHPHS

15.18

-2.36

-0.02

PSTPSQMNY

16.47

-4.98

-2.64

PLPPPARSQ

17.22

-3.53

-1.19

Q12446

PPPPPHRHV

13.33

-5.75

-3.41

PQLPNRNNR

13.92

-3.70

-1.36

RPLPQLPNR

14.03

-6.96

-4.62

Q01560

PPPPPGEHM

11.27

-6.49

-4.15

HHQPPEPQP

17.22

-4.58

-2.24

QPPEPQPYY

18.07

-3.68

-1.34

P53735

VPPPPRTRS

15.61

-4.37

-2.03

PPPPRTRSP

18.08

-4.54

-2.20

P33334

PSLNPIPHF

12.52

-4.68

-2.34

NAIPGGPKF

13.69

-5.49

-3.15

NNAIPGGPK

13.87

-3.09

-0.75

P40523

LGAPPGTVP

15.88

-5.22

-2.88

LAPPPHGPF

16.63

-6.36

-4.02

APPPHGPFS

17.75

-1.08

1.26

P40563

PSERPKRRA

15.04

-4.08

-1.74

GMVNPGQLP

16.49

-4.55

-2.21

RAPPPVPKK

17.59

-7.68

-5.34

Q08989

GDHPKGPPP

17.06

-5.50

-3.16

PPPPDEKGR

17.29

-3.81

-1.47

P37370

KVPQNRPHM

9.01

-6.34

-4.00

RPHMPSVRP

12.73

-6.93

-4.59

QMPKPRPFQ

13.25

-6.10

-3.76

P39743

NATIPEDNP

14.41

-4.13

-1.79

Q03900

PNTPSGAPK

16.85

-2.59

-0.25

 


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